Assay Details
Target Gene Details
Entrez Gene ID: | 23359 |
Gene Name: | family with sequence similarity 189 member A1 |
Gene Aliases: |
TMEM228 |
Location: |
Chr.15:29120252-29570723 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM189A1 | NM_015307.1 | 11 | 1879 | NP_056122.1 |
XM_011521407.2 | 12 | 2036 | XP_011519709.1 | |
AB011146.1 | 8 | 1479 | BAA25500.1 | |
AK295622.1 | 3 | 873 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1040778 | Chr.15:28689598 - 30515727 on Build GRCh38 | Loss | FAM189A1 GOLGA8J DKFZP434L187 NSMCE3 WHAMMP2 GOLGA6L7P GOLGA8R PDCD6IPP2 LOC100289656 LOC100130111 GOLGA8M GOLGA8T APBA2 LOC107984752 LOC105370746 ULK4P3 TJP1 LOC101060569 CHRFAM7A LOC105370751 |
nsv515798 | Chr.15:29068198 - 29146274 on Build GRCh38 | Gain+Loss | FAM189A1 APBA2 |
nsv471232 | Chr.15:29087561 - 29139979 on Build GRCh38 | Loss | FAM189A1 APBA2 |
nsv527255 | Chr.15:28754022 - 30074044 on Build GRCh38 | Gain | PDCD6IPP2 FAM189A1 LOC100289656 LOC100130111 NSMCE3 APBA2 LOC107984752 WHAMMP2 GOLGA6L7P TJP1 |
esv2751526 | Chr.15:28724519 - 30687025 on Build GRCh38 | Loss | DKFZP434L187 ULK4P2 WHAMMP2 LOC100996413 LOC100130111 GOLGA8T ULK4P3 TJP1 CHRFAM7A LOC105370751 FAM189A1 GOLGA8J NSMCE3 LOC101927579 LOC100288637 GOLGA6L7P GOLGA8R GOLGA8H PDCD6IPP2 ARHGAP11B LOC100289656 APBA2 LOC107984752 LOC105370746 LOC101060569 |
nsv1039798 | Chr.15:28724126 - 30158154 on Build GRCh38 | Gain | FAM189A1 GOLGA8J NSMCE3 WHAMMP2 GOLGA6L7P PDCD6IPP2 LOC100289656 LOC100130111 GOLGA8T APBA2 LOC107984752 ULK4P3 TJP1 |
nsv568679 | Chr.15:29119123 - 29126370 on Build GRCh38 | Loss | FAM189A1 |
nsv568675 | Chr.15:29035149 - 29916451 on Build GRCh38 | Gain | FAM189A1 LOC100130111 NSMCE3 APBA2 TJP1 |
nsv524362 | Chr.15:29089598 - 29155854 on Build GRCh38 | Loss | FAM189A1 APBA2 |