Assay Details
Target Gene Details
Entrez Gene ID: | 54822 |
Gene Name: | transient receptor potential cation channel subfamily M member 7 |
Gene Aliases: |
ALSPDC, CHAK, CHAK1, LTRPC7, LTrpC-7, TRP-PLIK |
Location: |
Chr.15:50557158-50686835 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 30 - Exon 31 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRPM7 | NM_001301212.1 | NP_001288141.1 | ||
NM_017672.5 | NP_060142.3 | |||
XM_005254486.3 | XP_005254543.1 | |||
XM_017022350.1 | XP_016877839.1 | |||
XM_017022351.1 | XP_016877840.1 | |||
XM_017022352.1 | XP_016877841.1 | |||
XM_017022353.1 | XP_016877842.1 | |||
XM_017022354.1 | XP_016877843.1 | |||
XM_017022355.1 | XP_016877844.1 | |||
AF346629.2 | AAK19738.2 | |||
AK172800.1 | BAD18773.1 | |||
AY032950.1 | AAK44211.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1055119 | Chr.15:50569273 - 50608488 on Build GRCh38 | Gain | TRPM7 |
nsv1050385 | Chr.15:50551298 - 50657601 on Build GRCh38 | Gain | TRPM7 |
nsv471242 | Chr.15:50478671 - 50892386 on Build GRCh38 | Gain | TRPM7 SPPL2A USP8 USP50 |
nsv569398 | Chr.15:50496928 - 51002798 on Build GRCh38 | Loss | TRPM7 SPPL2A USP8 USP50 DCAF13P3 AP4E1 |
nsv1047443 | Chr.15:50452584 - 51354826 on Build GRCh38 | Gain | PIRC66 TRPM7 CYP19A1 DCAF13P3 MIR7973-2 MIR7973-1 GLDN MIR4713 SPPL2A USP8 TNFAIP8L3 USP50 AP4E1 |
nsv569401 | Chr.15:50586433 - 50613583 on Build GRCh38 | Loss | TRPM7 |
dgv2594n100 | Chr.15:50469213 - 50823338 on Build GRCh38 | Gain | TRPM7 SPPL2A USP8 USP50 |
dgv4526n54 | Chr.15:50582767 - 51475068 on Build GRCh38 | Gain | MIR7973-2 PIRC66 MIR7973-1 GLDN MIR4713 TRPM7 DMXL2 SPPL2A CYP19A1 TNFAIP8L3 DCAF13P3 AP4E1 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |