Assay Details
Target Gene Details
Entrez Gene ID: | 57538 |
Gene Name: | alpha kinase 3 |
Gene Aliases: |
MAK, MIDORI |
Location: |
Chr.15:84816631-84873482 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ALPK3 | NM_020778.4 | NP_065829.3 | ||
XM_017022444.1 | XP_016877933.1 | |||
XM_017022445.1 | XP_016877934.1 | |||
AY044449.1 | AAK95951.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2760049 | Chr.15:84719698 - 84873299 on Build GRCh38 | Loss | ZNF592 ALPK3 |
esv2672879 | Chr.15:84183834 - 85188520 on Build GRCh38 | Deletion | LOC440300 ZNF592 WDR73 UBE2Q2L GOLGA6L4 ZSCAN2 SEC11A CSPG4P5 SLC28A1 LOC102724135 GOLGA2P7 SCAND2P LINC00933 LOC103171574 NMB PDE8A UBE2Q2P1 ALPK3 LOC105376722 GOLGA6L5P |
More Information
Additional Information:
For this assay, SNP(s) [rs115023375,rs72630466] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |