Assay Details
Target Gene Details
Entrez Gene ID: | 9612 |
Gene Name: | nuclear receptor corepressor 2 |
Gene Aliases: |
CTG26, N-CoR2, SMAP270, SMRT, SMRTE, SMRTE-tau, TNRC14, TRAC, TRAC-1, TRAC1 |
Location: |
Chr.12:124324411-124567464 on Build GRCh38 |
Assay Gene Location: | Within Exon 41 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
NCOR2 | NM_001077261.3 | 40 | 6477 | NP_001070729.2 |
NM_001206654.1 | 40 | 6477 | NP_001193583.1 | |
NM_006312.5 | 41 | 6507 | NP_006303.4 | |
AF113003.1 | 40 | 6196 | AAD20946.1 | |
AF125672.1 | 39 | 6321 | AAD22973.1 | |
AK127788.1 | 1 | 835 | ||
AY965853.1 | 39 | 6321 | AAX77219.1 | |
BC004326.1 | 2 | 462 | AAH04326.1 | |
S83390.1 | 7 | 1544 | AAB50847.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv560540 | Chr.12:124327309 - 124405685 on Build GRCh38 | Loss | NCOR2 MIR6880 |
nsv818930 | Chr.12:124256444 - 124391587 on Build GRCh38 | Gain | LOC105370045 ZNF664-FAM101A FAM101A NCOR2 MIR6880 |
esv3631012 | Chr.12:124290695 - 124349764 on Build GRCh38 | Gain | LOC105370045 ZNF664-FAM101A FAM101A NCOR2 MIR6880 |
esv3631010 | Chr.12:124288701 - 124749461 on Build GRCh38 | Gain | LOC105370045 ZNF664-FAM101A FAM101A NCOR2 MIR6880 |
nsv832535 | Chr.12:124326808 - 124500683 on Build GRCh38 | Gain | NCOR2 MIR6880 |
nsv952500 | Chr.12:124296455 - 124567454 on Build GRCh38 | Deletion | LOC105370045 ZNF664-FAM101A FAM101A NCOR2 MIR6880 |
esv3631011 | Chr.12:124289768 - 124548418 on Build GRCh38 | Gain | LOC105370045 ZNF664-FAM101A FAM101A NCOR2 MIR6880 |
nsv470322 | Chr.12:124313867 - 124452057 on Build GRCh38 | Loss | ZNF664-FAM101A FAM101A NCOR2 MIR6880 |
More Information
Additional Information:
For this assay, SNP(s) [rs116511777] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |