Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | TALDO1 DEAF1 MIR210HG MUC6 CHID1 TMEM80 RASSF7 SNORA52 PTDSS2 PKP3 MIR6744 IRF7 MIR210 MUC5AC AP2A2 LMNTD2 PNPLA2 POLR2L PHRF1 SCT LRRC56 LOC143666 B4GALNT4 RPLP2 CEND1 PIDD1 CD151 CRACR2B TOLLIP HRAS TSPAN4 PANO1 MUC2 ANO9 CDHR5 LOC101059906 LOC171391 SIGIRR PDDC1 RNH1 MUC5B SLC25A22 DRD4 LOC101927503 EPS8L2 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | DEAF1 CDHR5 PHRF1 SCT IRF7 DRD4 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TALDO1 DEAF1 TMEM80 DRD4 EPS8L2 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | TALDO1 DEAF1 MIR210HG MUC6 CHID1 TMEM80 RASSF7 SNORA52 PTDSS2 MIR6744 IRF7 MIR210 TOLLIP-AS1 MUC5AC AP2A2 LMNTD2 PNPLA2 POLR2L PHRF1 SCT LRRC56 LOC143666 RPLP2 CEND1 PIDD1 CD151 CRACR2B TOLLIP HRAS TSPAN4 PANO1 MUC2 ANO9 CDHR5 LOC101059906 LOC171391 SIGIRR PDDC1 RNH1 MUC5B SLC25A22 DRD4 LOC101927503 EPS8L2 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | LRRC56 LOC143666 DEAF1 MIR210HG RASSF7 IRF7 MIR210 HRAS LMNTD2 CDHR5 PHRF1 SCT DRD4 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | LRRC56 LOC143666 DEAF1 MIR210HG RASSF7 PTDSS2 IRF7 MIR210 HRAS LMNTD2 CDHR5 LOC101059906 RNH1 PHRF1 SCT DRD4 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | TALDO1 DEAF1 MIR210HG CHID1 TMEM80 RASSF7 SNORA52 PTDSS2 PKP3 IRF7 MIR210 AP2A2 LMNTD2 PNPLA2 POLR2L PHRF1 SCT LRRC56 LOC143666 B4GALNT4 RPLP2 CEND1 PIDD1 CD151 CRACR2B HRAS TSPAN4 PANO1 ANO9 CDHR5 LOC101059906 LOC171391 SIGIRR PDDC1 RNH1 SLC25A22 DRD4 EPS8L2 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | TALDO1 DEAF1 MIR210HG CHID1 TMEM80 RASSF7 SNORA52 PTDSS2 IRF7 MIR210 LMNTD2 PNPLA2 POLR2L PHRF1 SCT LRRC56 LOC143666 RPLP2 CEND1 PIDD1 CD151 CRACR2B HRAS TSPAN4 PANO1 CDHR5 LOC101059906 LOC171391 PDDC1 RNH1 SLC25A22 DRD4 EPS8L2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |