Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | LRRC56 SIGIRR HRAS CRACR2B RASSF7 TALDO1 MUC5B B4GALNT4 PDDC1 EPS8L2 LMNTD2 TSPAN4 SCT RNH1 DRD4 MIR6744 TMEM80 PANO1 CDHR5 MIR210 CEND1 SNORA52 LOC143666 LOC101927503 PIDD1 DEAF1 AP2A2 MUC5AC LOC171391 MIR210HG ANO9 MUC6 PNPLA2 PTDSS2 LOC101059906 MUC2 TOLLIP POLR2L RPLP2 SLC25A22 IRF7 PKP3 PHRF1 CD151 CHID1 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | CDHR5 IRF7 PHRF1 SCT DRD4 DEAF1 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TALDO1 EPS8L2 DRD4 TMEM80 DEAF1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | LRRC56 SIGIRR HRAS CRACR2B RASSF7 TALDO1 MUC5B PDDC1 EPS8L2 LMNTD2 TSPAN4 SCT RNH1 DRD4 MIR6744 TMEM80 PANO1 CDHR5 MIR210 CEND1 SNORA52 LOC143666 LOC101927503 TOLLIP-AS1 PIDD1 DEAF1 AP2A2 MUC5AC LOC171391 MIR210HG ANO9 MUC6 PNPLA2 PTDSS2 LOC101059906 MUC2 TOLLIP POLR2L RPLP2 SLC25A22 IRF7 PHRF1 CD151 CHID1 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | LRRC56 HRAS RASSF7 LMNTD2 MIR210HG SCT DRD4 CDHR5 MIR210 IRF7 LOC143666 PHRF1 DEAF1 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | LRRC56 HRAS RASSF7 LMNTD2 MIR210HG SCT PTDSS2 RNH1 LOC101059906 DRD4 CDHR5 MIR210 IRF7 LOC143666 PHRF1 DEAF1 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LRRC56 SIGIRR HRAS CRACR2B RASSF7 TALDO1 B4GALNT4 PDDC1 EPS8L2 LMNTD2 TSPAN4 SCT RNH1 DRD4 TMEM80 PANO1 CDHR5 MIR210 CEND1 SNORA52 LOC143666 PIDD1 DEAF1 AP2A2 LOC171391 MIR210HG ANO9 PNPLA2 PTDSS2 LOC101059906 POLR2L RPLP2 SLC25A22 IRF7 PKP3 PHRF1 CD151 CHID1 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | LRRC56 HRAS CRACR2B RASSF7 TALDO1 PDDC1 EPS8L2 LMNTD2 TSPAN4 SCT RNH1 DRD4 TMEM80 PANO1 CDHR5 MIR210 CEND1 SNORA52 LOC143666 PIDD1 DEAF1 LOC171391 MIR210HG PNPLA2 PTDSS2 LOC101059906 POLR2L RPLP2 SLC25A22 IRF7 PHRF1 CD151 CHID1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |