Assay Details
Target Gene Details
Entrez Gene ID: | 53841 |
Gene Name: | cadherin related family member 5 |
Gene Aliases: |
MLPCDH, MU-PCDH, MUCDHL, MUPCDH |
Location: |
Chr.11:616565-625067 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CDHR5 | NM_001171968.1 | NP_001165439.1 | ||
NM_021924.4 | NP_068743.2 | |||
NM_031264.3 | NP_112554.2 | |||
XM_006718253.3 | XP_006718316.1 | |||
XM_011520188.2 | XP_011518490.1 | |||
XM_011520189.2 | XP_011518491.1 | |||
XM_011520190.2 | XP_011518492.1 | |||
XM_011520191.2 | XP_011518493.1 | |||
AF258675.1 | AAG16732.1 | |||
AF258676.1 | AAG16733.1 | |||
AF276242.1 | AAG30821.1 | |||
AF301909.1 | AAG33495.1 | |||
AK000226.1 | BAA91021.1 | |||
AK000384.1 | BAA91130.1 | |||
AK300991.1 | ||||
AK308040.1 | ||||
AK309157.1 | ||||
AY358368.1 | AAQ88734.1 | |||
BC038405.1 | AAH38405.1 | |||
DQ491193.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv552865 | Chr.11:612843 - 626730 on Build GRCh38 | Loss | IRF7 CDHR5 SCT |
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | IRF7 RASSF7 DRD4 MIR210 MIR210HG PHRF1 DEAF1 LMNTD2 LOC143666 CDHR5 SCT |
nsv951270 | Chr.11:528401 - 628100 on Build GRCh38 | Deletion | IRF7 HRAS RASSF7 MIR210 MIR210HG LOC101059906 PHRF1 LRRC56 LMNTD2 LOC143666 CDHR5 SCT |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | RPLP2 CEND1 PTDSS2 PHRF1 CRACR2B DEAF1 SIGIRR LMNTD2 TALDO1 MUC6 RNH1 LOC171391 MUC5AC DRD4 MUC2 PANO1 CHID1 EPS8L2 LOC101059906 ANO9 LOC101927503 MUC5B PDDC1 IRF7 SLC25A22 TSPAN4 PIDD1 TMEM80 MIR6744 MIR210 MIR210HG PNPLA2 PKP3 POLR2L AP2A2 HRAS TOLLIP CD151 RASSF7 SNORA52 LRRC56 LOC143666 CDHR5 SCT B4GALNT4 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | IRF7 DRD4 PHRF1 DEAF1 CDHR5 SCT |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | RPLP2 CEND1 PTDSS2 PHRF1 CRACR2B DEAF1 SIGIRR LMNTD2 TALDO1 MUC6 RNH1 LOC171391 TOLLIP-AS1 MUC5AC DRD4 MUC2 PANO1 CHID1 EPS8L2 LOC101059906 ANO9 LOC101927503 MUC5B PDDC1 IRF7 SLC25A22 TSPAN4 PIDD1 TMEM80 MIR6744 MIR210 MIR210HG PNPLA2 POLR2L AP2A2 HRAS TOLLIP CD151 RASSF7 SNORA52 LRRC56 LOC143666 CDHR5 SCT |
esv2762889 | Chr.11:606294 - 653614 on Build GRCh38 | Loss | IRF7 DRD4 PHRF1 DEAF1 CDHR5 SCT |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | IRF7 MIR210 MIR210HG PHRF1 DEAF1 LMNTD2 HRAS RASSF7 DRD4 LRRC56 LOC143666 CDHR5 SCT |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | IRF7 MIR210 PTDSS2 MIR210HG PHRF1 DEAF1 LMNTD2 RNH1 HRAS RASSF7 DRD4 LOC101059906 LRRC56 LOC143666 CDHR5 SCT |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | RPLP2 CEND1 PTDSS2 PHRF1 CRACR2B DEAF1 SIGIRR LMNTD2 TALDO1 RNH1 LOC171391 DRD4 PANO1 CHID1 EPS8L2 LOC101059906 ANO9 PDDC1 IRF7 SLC25A22 TSPAN4 PIDD1 TMEM80 MIR210 MIR210HG PNPLA2 PKP3 POLR2L AP2A2 HRAS CD151 RASSF7 SNORA52 LRRC56 LOC143666 CDHR5 SCT B4GALNT4 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | RPLP2 CEND1 PTDSS2 PHRF1 CRACR2B DEAF1 LMNTD2 TALDO1 RNH1 LOC171391 DRD4 PANO1 CHID1 EPS8L2 LOC101059906 PDDC1 IRF7 SLC25A22 TSPAN4 PIDD1 TMEM80 MIR210 MIR210HG PNPLA2 POLR2L HRAS CD151 RASSF7 SNORA52 LRRC56 LOC143666 CDHR5 SCT |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |