Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3625074 | Chr.11:669311 - 702135 on Build GRCh38 | Loss | DEAF1 TMEM80 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | IRF7 RNH1 MUC5AC SLC25A22 B4GALNT4 DRD4 LOC101927503 PANO1 MIR210HG DEAF1 SCT TSPAN4 RASSF7 POLR2L SIGIRR ANO9 CDHR5 PNPLA2 RPLP2 PHRF1 HRAS CHID1 LOC143666 MIR6744 MIR210 CEND1 CD151 CRACR2B MUC5B PDDC1 PTDSS2 EPS8L2 LRRC56 SNORA52 PIDD1 MUC6 AP2A2 PKP3 LOC171391 TALDO1 LOC101059906 TOLLIP TMEM80 LMNTD2 MUC2 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | DRD4 EPS8L2 DEAF1 TALDO1 TMEM80 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | IRF7 RNH1 MUC5AC SLC25A22 DRD4 LOC101927503 PANO1 MIR210HG DEAF1 SCT TSPAN4 RASSF7 POLR2L SIGIRR ANO9 CDHR5 PNPLA2 RPLP2 PHRF1 HRAS CHID1 LOC143666 MIR6744 MIR210 CEND1 CD151 CRACR2B MUC5B PDDC1 PTDSS2 EPS8L2 LRRC56 TOLLIP-AS1 SNORA52 PIDD1 MUC6 AP2A2 LOC171391 TALDO1 LOC101059906 TOLLIP TMEM80 LMNTD2 MUC2 |
esv2412904 | Chr.11:676155 - 676552 on Build GRCh38 | Deletion | DEAF1 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | MIR210 IRF7 RNH1 DRD4 PTDSS2 MIR210HG LRRC56 DEAF1 SCT RASSF7 CDHR5 LOC101059906 PHRF1 HRAS LMNTD2 LOC143666 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | IRF7 RNH1 SLC25A22 B4GALNT4 DRD4 PANO1 MIR210HG DEAF1 SCT TSPAN4 RASSF7 POLR2L SIGIRR ANO9 CDHR5 PNPLA2 RPLP2 PHRF1 HRAS CHID1 LOC143666 MIR210 CEND1 CD151 CRACR2B PDDC1 PTDSS2 EPS8L2 LRRC56 SNORA52 PIDD1 AP2A2 PKP3 LOC171391 TALDO1 LOC101059906 TMEM80 LMNTD2 |
nsv512198 | Chr.11:676286 - 678291 on Build GRCh38 | Loss | DEAF1 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | IRF7 RNH1 SLC25A22 DRD4 PANO1 MIR210HG DEAF1 SCT TSPAN4 RASSF7 POLR2L CDHR5 PNPLA2 RPLP2 PHRF1 HRAS CHID1 LOC143666 MIR210 CEND1 CD151 CRACR2B PDDC1 PTDSS2 EPS8L2 LRRC56 SNORA52 PIDD1 LOC171391 TALDO1 LOC101059906 TMEM80 LMNTD2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |