Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | LMNTD2 MIR210HG PHRF1 LOC143666 SCT IRF7 RASSF7 DEAF1 DRD4 MIR210 CDHR5 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | LOC171391 CRACR2B PHRF1 TOLLIP RASSF7 DEAF1 LRRC56 HRAS SLC25A22 MUC2 TSPAN4 MIR6744 SIGIRR PDDC1 PKP3 MUC5AC DRD4 LOC101059906 MIR210 B4GALNT4 RPLP2 PANO1 MIR210HG TMEM80 PIDD1 MUC6 IRF7 AP2A2 RNH1 PNPLA2 CDHR5 CEND1 SNORA52 CHID1 PTDSS2 LMNTD2 CD151 TALDO1 LOC143666 SCT POLR2L MUC5B LOC101927503 ANO9 EPS8L2 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | PHRF1 SCT IRF7 DEAF1 DRD4 CDHR5 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TMEM80 TALDO1 DEAF1 DRD4 EPS8L2 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | LOC171391 CRACR2B PHRF1 TOLLIP RASSF7 DEAF1 LRRC56 HRAS SLC25A22 MUC2 TSPAN4 TOLLIP-AS1 MIR6744 SIGIRR PDDC1 MUC5AC DRD4 LOC101059906 MIR210 RPLP2 PANO1 MIR210HG TMEM80 PIDD1 MUC6 IRF7 AP2A2 RNH1 PNPLA2 CDHR5 CEND1 SNORA52 CHID1 PTDSS2 LMNTD2 CD151 TALDO1 LOC143666 SCT POLR2L MUC5B LOC101927503 ANO9 EPS8L2 |
esv2762889 | Chr.11:606294 - 653614 on Build GRCh38 | Loss | PHRF1 SCT IRF7 DEAF1 DRD4 CDHR5 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | MIR210HG PHRF1 IRF7 RASSF7 DEAF1 LRRC56 CDHR5 HRAS LMNTD2 LOC143666 SCT DRD4 MIR210 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | MIR210HG PHRF1 IRF7 RASSF7 DEAF1 LRRC56 RNH1 CDHR5 HRAS PTDSS2 LMNTD2 LOC143666 SCT DRD4 LOC101059906 MIR210 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LOC171391 CRACR2B PHRF1 RASSF7 DEAF1 LRRC56 HRAS SLC25A22 TSPAN4 SIGIRR PDDC1 PKP3 DRD4 LOC101059906 MIR210 B4GALNT4 RPLP2 PANO1 MIR210HG TMEM80 PIDD1 IRF7 AP2A2 RNH1 PNPLA2 CDHR5 CEND1 SNORA52 CHID1 PTDSS2 LMNTD2 CD151 TALDO1 LOC143666 SCT POLR2L ANO9 EPS8L2 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | LOC171391 CRACR2B PHRF1 RASSF7 DEAF1 LRRC56 HRAS SLC25A22 TSPAN4 PDDC1 DRD4 LOC101059906 MIR210 RPLP2 PANO1 MIR210HG TMEM80 PIDD1 IRF7 RNH1 PNPLA2 CDHR5 CEND1 SNORA52 CHID1 PTDSS2 LMNTD2 CD151 TALDO1 LOC143666 SCT POLR2L EPS8L2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |