Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 | ||||
BF058197.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | LMNTD2 PGGHG IFITM3 B4GALNT4 HRAS PKP3 IFITM1 RASSF7 MIR210 MIR210HG IFITM5 PHRF1 CDHR5 ANO9 LOC143666 RNH1 LOC101059906 SIGIRR IFITM2 LRRC56 PTDSS2 IRF7 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | B4GALNT4 PKP3 SIGIRR ANO9 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | B4GALNT4 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | B4GALNT4 PKP3 RNH1 SIGIRR PTDSS2 ANO9 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | B4GALNT4 PKP3 SIGIRR ANO9 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | NLRP6 PGGHG BET1L IFITM3 B4GALNT4 PKP3 IFITM1 IFITM5 RIC8A PSMD13 ANO9 MIR6743 SIRT3 SIGIRR IFITM2 PTDSS2 ODF3 |
nsv825676 | Chr.11:366965 - 372662 on Build GRCh38 | Gain | B4GALNT4 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | B4GALNT4 PKP3 SIGIRR PTDSS2 ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LMNTD2 DEAF1 PKP3 CEND1 MIR210 TMEM80 MIR210HG SLC25A22 CRACR2B LOC143666 SCT PIDD1 CD151 CHID1 PTDSS2 PDDC1 POLR2L DRD4 SNORA52 B4GALNT4 HRAS EPS8L2 RASSF7 TSPAN4 LOC171391 PHRF1 CDHR5 ANO9 PNPLA2 PANO1 RNH1 LOC101059906 RPLP2 SIGIRR LRRC56 TALDO1 AP2A2 IRF7 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |