Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | CDHR5 MIR210 PHRF1 MIR210HG LOC143666 DEAF1 RASSF7 IRF7 LMNTD2 DRD4 SCT |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | PKP3 MUC2 MIR210 LOC101059906 PDDC1 MIR210HG POLR2L LRRC56 ANO9 HRAS MUC5B SCT PIDD1 TSPAN4 PTDSS2 SLC25A22 B4GALNT4 PHRF1 RPLP2 TMEM80 RNH1 LMNTD2 CEND1 CD151 MUC6 AP2A2 LOC101927503 CRACR2B PANO1 SIGIRR TOLLIP CDHR5 LOC171391 PNPLA2 MUC5AC MIR6744 LOC143666 DEAF1 RASSF7 TALDO1 SNORA52 IRF7 DRD4 CHID1 EPS8L2 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | CDHR5 PHRF1 DEAF1 IRF7 DRD4 SCT |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | DEAF1 TMEM80 TALDO1 DRD4 EPS8L2 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | MUC2 MIR210 LOC101059906 PDDC1 MIR210HG POLR2L LRRC56 ANO9 HRAS MUC5B SCT PIDD1 TSPAN4 PTDSS2 SLC25A22 PHRF1 RPLP2 TMEM80 RNH1 LMNTD2 CEND1 CD151 MUC6 AP2A2 LOC101927503 CRACR2B TOLLIP-AS1 PANO1 SIGIRR TOLLIP CDHR5 LOC171391 PNPLA2 MUC5AC MIR6744 LOC143666 DEAF1 RASSF7 TALDO1 SNORA52 IRF7 DRD4 CHID1 EPS8L2 |
esv2762889 | Chr.11:606294 - 653614 on Build GRCh38 | Loss | CDHR5 PHRF1 DEAF1 IRF7 DRD4 SCT |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | MIR210 MIR210HG LRRC56 HRAS SCT CDHR5 PHRF1 LOC143666 DEAF1 RASSF7 IRF7 LMNTD2 DRD4 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | MIR210 LOC101059906 MIR210HG LRRC56 HRAS SCT PTDSS2 CDHR5 PHRF1 LOC143666 DEAF1 RASSF7 RNH1 IRF7 LMNTD2 DRD4 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PKP3 MIR210 LOC101059906 PDDC1 MIR210HG POLR2L LRRC56 ANO9 HRAS SCT PIDD1 TSPAN4 PTDSS2 SLC25A22 B4GALNT4 PHRF1 RPLP2 TMEM80 RNH1 LMNTD2 CEND1 CD151 AP2A2 CRACR2B PANO1 SIGIRR CDHR5 LOC171391 PNPLA2 LOC143666 DEAF1 RASSF7 TALDO1 SNORA52 IRF7 DRD4 CHID1 EPS8L2 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | MIR210 LOC101059906 PDDC1 MIR210HG POLR2L LRRC56 HRAS SCT PIDD1 TSPAN4 PTDSS2 SLC25A22 PHRF1 RPLP2 TMEM80 RNH1 LMNTD2 CEND1 CD151 CRACR2B PANO1 CDHR5 LOC171391 PNPLA2 LOC143666 DEAF1 RASSF7 TALDO1 SNORA52 IRF7 DRD4 CHID1 EPS8L2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |