Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | MIR210HG LMNTD2 PHRF1 IRF7 RASSF7 DRD4 MIR210 CDHR5 DEAF1 LOC143666 SCT |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | MIR210HG TMEM80 PTDSS2 PNPLA2 ANO9 TOLLIP LOC171391 MIR210 MIR6744 LRRC56 B4GALNT4 CDHR5 MUC2 IRF7 PDDC1 PANO1 CHID1 DRD4 PIDD1 SCT LOC101927503 LOC101059906 PKP3 CEND1 TSPAN4 CD151 DEAF1 HRAS LOC143666 RPLP2 SLC25A22 LMNTD2 SNORA52 PHRF1 CRACR2B POLR2L RNH1 SIGIRR RASSF7 TALDO1 MUC5B MUC6 AP2A2 EPS8L2 MUC5AC |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | PHRF1 IRF7 DRD4 CDHR5 DEAF1 SCT |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TMEM80 TALDO1 DRD4 DEAF1 EPS8L2 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | MIR210HG TMEM80 PTDSS2 PNPLA2 ANO9 TOLLIP LOC171391 MIR210 MIR6744 LRRC56 CDHR5 MUC2 IRF7 PDDC1 PANO1 CHID1 DRD4 PIDD1 SCT TOLLIP-AS1 LOC101927503 LOC101059906 CEND1 TSPAN4 CD151 DEAF1 HRAS LOC143666 RPLP2 SLC25A22 LMNTD2 SNORA52 PHRF1 CRACR2B POLR2L RNH1 SIGIRR RASSF7 TALDO1 MUC5B MUC6 AP2A2 EPS8L2 MUC5AC |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | MIR210HG MIR210 LRRC56 CDHR5 DEAF1 HRAS LOC143666 LMNTD2 PHRF1 IRF7 RASSF7 DRD4 SCT |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | MIR210HG LOC101059906 PTDSS2 MIR210 LRRC56 CDHR5 DEAF1 HRAS LOC143666 LMNTD2 PHRF1 IRF7 RNH1 RASSF7 DRD4 SCT |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | MIR210HG TMEM80 PTDSS2 PNPLA2 ANO9 LOC171391 MIR210 LRRC56 B4GALNT4 CDHR5 IRF7 PDDC1 PANO1 CHID1 DRD4 PIDD1 SCT LOC101059906 PKP3 CEND1 TSPAN4 CD151 DEAF1 HRAS LOC143666 RPLP2 SLC25A22 LMNTD2 SNORA52 PHRF1 CRACR2B POLR2L RNH1 SIGIRR RASSF7 TALDO1 AP2A2 EPS8L2 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | MIR210HG TMEM80 PTDSS2 PNPLA2 LOC171391 MIR210 LRRC56 CDHR5 IRF7 PDDC1 PANO1 CHID1 DRD4 PIDD1 SCT LOC101059906 CEND1 TSPAN4 CD151 DEAF1 HRAS LOC143666 RPLP2 SLC25A22 LMNTD2 SNORA52 PHRF1 CRACR2B POLR2L RNH1 RASSF7 TALDO1 EPS8L2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |