Assay Details
Target Gene Details
Entrez Gene ID: | 53841 |
Gene Name: | cadherin related family member 5 |
Gene Aliases: |
MLPCDH, MU-PCDH, MUCDHL, MUPCDH |
Location: |
Chr.11:616565-625067 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CDHR5 | NM_001171968.1 | NP_001165439.1 | ||
NM_021924.4 | NP_068743.2 | |||
NM_031264.3 | NP_112554.2 | |||
XM_006718253.3 | XP_006718316.1 | |||
XM_011520188.2 | XP_011518490.1 | |||
XM_011520189.2 | XP_011518491.1 | |||
XM_011520190.2 | XP_011518492.1 | |||
XM_011520191.2 | XP_011518493.1 | |||
AF258675.1 | AAG16732.1 | |||
AF258676.1 | AAG16733.1 | |||
AF276242.1 | AAG30821.1 | |||
AF301909.1 | AAG33495.1 | |||
AK000226.1 | BAA91021.1 | |||
AK000384.1 | BAA91130.1 | |||
AK300991.1 | ||||
AK308040.1 | ||||
AK309157.1 | ||||
AY358368.1 | AAQ88734.1 | |||
BC038405.1 | AAH38405.1 | |||
DA373160.1 | ||||
DQ491193.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv552865 | Chr.11:612843 - 626730 on Build GRCh38 | Loss | CDHR5 SCT IRF7 |
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | LOC143666 DEAF1 CDHR5 MIR210 PHRF1 RASSF7 MIR210HG SCT LMNTD2 IRF7 DRD4 |
nsv951270 | Chr.11:528401 - 628100 on Build GRCh38 | Deletion | LOC143666 CDHR5 MIR210 LOC101059906 HRAS PHRF1 LRRC56 RASSF7 MIR210HG SCT LMNTD2 IRF7 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | PANO1 LOC143666 CDHR5 ANO9 LOC101059906 EPS8L2 CD151 PHRF1 MUC5AC RPLP2 TSPAN4 LOC101927503 MIR210HG SCT MIR6744 LOC171391 DEAF1 PIDD1 AP2A2 CHID1 MUC5B LRRC56 CEND1 PKP3 MUC2 DRD4 B4GALNT4 MUC6 MIR210 HRAS PNPLA2 TOLLIP SNORA52 TALDO1 POLR2L SIGIRR PDDC1 TMEM80 RASSF7 CRACR2B PTDSS2 SLC25A22 LMNTD2 RNH1 IRF7 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | DEAF1 CDHR5 PHRF1 SCT IRF7 DRD4 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | PANO1 LOC143666 CDHR5 ANO9 LOC101059906 TOLLIP-AS1 EPS8L2 CD151 PHRF1 MUC5AC RPLP2 TSPAN4 LOC101927503 MIR210HG SCT MIR6744 LOC171391 DEAF1 PIDD1 AP2A2 CHID1 MUC5B LRRC56 CEND1 MUC2 DRD4 MUC6 MIR210 HRAS PNPLA2 TOLLIP SNORA52 TALDO1 POLR2L SIGIRR PDDC1 TMEM80 RASSF7 CRACR2B PTDSS2 SLC25A22 LMNTD2 RNH1 IRF7 |
esv2762889 | Chr.11:606294 - 653614 on Build GRCh38 | Loss | DEAF1 CDHR5 PHRF1 SCT IRF7 DRD4 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | LOC143666 CDHR5 MIR210 HRAS PHRF1 MIR210HG SCT DEAF1 LRRC56 RASSF7 LMNTD2 IRF7 DRD4 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | LOC143666 CDHR5 MIR210 LOC101059906 HRAS PHRF1 MIR210HG SCT DEAF1 LRRC56 RASSF7 PTDSS2 LMNTD2 RNH1 IRF7 DRD4 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PANO1 LOC143666 CDHR5 ANO9 LOC101059906 EPS8L2 CD151 PHRF1 RPLP2 TSPAN4 MIR210HG SCT LOC171391 DEAF1 PIDD1 AP2A2 CHID1 LRRC56 CEND1 PKP3 DRD4 B4GALNT4 MIR210 HRAS PNPLA2 SNORA52 TALDO1 POLR2L SIGIRR PDDC1 TMEM80 RASSF7 CRACR2B PTDSS2 SLC25A22 LMNTD2 RNH1 IRF7 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | PANO1 LOC143666 CDHR5 LOC101059906 EPS8L2 CD151 PHRF1 RPLP2 TSPAN4 MIR210HG SCT LOC171391 DEAF1 PIDD1 CHID1 LRRC56 CEND1 DRD4 MIR210 HRAS PNPLA2 SNORA52 TALDO1 POLR2L PDDC1 TMEM80 RASSF7 CRACR2B PTDSS2 SLC25A22 LMNTD2 RNH1 IRF7 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |