Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | MIR210 ANO9 EPS8L2 PNPLA2 HRAS TSPAN4 SLC25A22 CHID1 IRF7 PKP3 PIDD1 SIGIRR MUC2 AP2A2 MUC5B PDDC1 SNORA52 RNH1 CD151 RPLP2 DRD4 PTDSS2 B4GALNT4 MIR6744 MIR210HG TMEM80 POLR2L CRACR2B DEAF1 MUC6 TOLLIP PANO1 CDHR5 MUC5AC PHRF1 LOC101059906 LOC171391 TALDO1 RASSF7 CEND1 LOC101927503 LOC143666 LRRC56 SCT LMNTD2 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | DRD4 EPS8L2 TALDO1 TMEM80 DEAF1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | MIR210 ANO9 EPS8L2 PNPLA2 HRAS TSPAN4 SLC25A22 CHID1 IRF7 TOLLIP-AS1 PIDD1 SIGIRR MUC2 AP2A2 MUC5B PDDC1 SNORA52 RNH1 CD151 RPLP2 DRD4 PTDSS2 MIR6744 MIR210HG TMEM80 POLR2L CRACR2B DEAF1 MUC6 TOLLIP PANO1 CDHR5 MUC5AC PHRF1 LOC101059906 LOC171391 TALDO1 RASSF7 CEND1 LOC101927503 LOC143666 LRRC56 SCT LMNTD2 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | DRD4 MIR210 MIR210HG HRAS DEAF1 IRF7 CDHR5 PHRF1 RASSF7 LOC143666 LRRC56 SCT LMNTD2 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | DRD4 PTDSS2 MIR210 MIR210HG HRAS DEAF1 IRF7 CDHR5 PHRF1 LOC101059906 RASSF7 RNH1 LOC143666 LRRC56 SCT LMNTD2 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | MIR210 ANO9 EPS8L2 PNPLA2 HRAS TSPAN4 SLC25A22 CHID1 IRF7 PKP3 PIDD1 SIGIRR AP2A2 PDDC1 SNORA52 RNH1 CD151 RPLP2 DRD4 PTDSS2 B4GALNT4 MIR210HG TMEM80 POLR2L CRACR2B DEAF1 PANO1 CDHR5 PHRF1 LOC101059906 LOC171391 TALDO1 RASSF7 CEND1 LOC143666 LRRC56 SCT LMNTD2 |
esv2743859 | Chr.11:663516 - 663851 on Build GRCh38 | Deletion | DEAF1 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | MIR210 EPS8L2 PNPLA2 HRAS TSPAN4 SLC25A22 CHID1 IRF7 PIDD1 PDDC1 SNORA52 RNH1 CD151 RPLP2 DRD4 PTDSS2 MIR210HG TMEM80 POLR2L CRACR2B DEAF1 PANO1 CDHR5 PHRF1 LOC101059906 LOC171391 TALDO1 RASSF7 CEND1 LOC143666 LRRC56 SCT LMNTD2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |