Assay Details
Target Gene Details
Entrez Gene ID: | 101927824 |
Gene Name: | translation initiation factor IF-2-like |
Gene Aliases: |
- |
Location: |
Chr.10:3052510-3069273 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC101927824 | XM_011519779.1 | XP_011518081.1 | ||
XM_011519781.1 | XP_011518083.1 | |||
XM_017017013.1 | XP_016872502.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv549814 | Chr.10:3055020 - 3170233 on Build GRCh38 | Loss | SNORD142 PITRM1 PFKP PITRM1-AS1 LOC101927824 |
dgv932n54 | Chr.10:2382612 - 3253481 on Build GRCh38 | Gain | LOC105376353 LOC107983989 SNORD142 PITRM1 LOC105376351 PFKP PITRM1-AS1 LOC101927824 |
nsv428229 | Chr.10:2618610 - 3156581 on Build GRCh38 | Gain | SNORD142 PITRM1 PFKP PITRM1-AS1 LOC101927824 |
esv2730995 | Chr.10:2770220 - 3706473 on Build GRCh38 | Deletion | LOC105376353 SNORD142 PITRM1 LOC105376360 PFKP LOC105376501 PITRM1-AS1 LOC101927824 |
nsv951237 | Chr.10:3063409 - 3069608 on Build GRCh38 | Deletion | PFKP LOC101927824 |
esv2760124 | Chr.10:2641047 - 3094525 on Build GRCh38 | Gain | PFKP LOC101927824 |
nsv517630 | Chr.10:2632486 - 3097509 on Build GRCh38 | Gain+Loss | PFKP LOC101927824 |
nsv470913 | Chr.10:3052993 - 3125271 on Build GRCh38 | Loss | PFKP LOC101927824 |
nsv549810 | Chr.10:3035272 - 3691194 on Build GRCh38 | Gain | LOC105376353 SNORD142 PITRM1 LOC105376360 PFKP LOC105376501 PITRM1-AS1 LOC101927824 |
esv34832 | Chr.10:2638872 - 3091456 on Build GRCh38 | Gain | PFKP LOC101927824 |
dgv933n54 | Chr.10:2644284 - 3091456 on Build GRCh38 | Gain | PFKP LOC101927824 |
nsv470912 | Chr.10:2650464 - 3091456 on Build GRCh38 | Gain | PFKP LOC101927824 |
esv26266 | Chr.10:2646665 - 3092022 on Build GRCh38 | Gain+Loss | PFKP LOC101927824 |
dgv660n100 | Chr.10:2641472 - 3092489 on Build GRCh38 | Gain | PFKP LOC101927824 |
dgv935n54 | Chr.10:3044294 - 3125271 on Build GRCh38 | Loss | PFKP LOC101927824 |
esv3622141 | Chr.10:2646620 - 3092104 on Build GRCh38 | Gain | PFKP LOC101927824 |
nsv825215 | Chr.10:3058658 - 3099236 on Build GRCh38 | Gain | PFKP LOC101927824 |
More Information
Additional Information:
For this assay, SNP(s) [rs76039948] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |