Assay Details
Target Gene Details
Entrez Gene ID: | 84435 |
Gene Name: | adhesion G protein-coupled receptor A1 |
Gene Aliases: |
GPR123 |
Location: |
Chr.10:133070929-133131675 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ADGRA1 | NM_001083909.2 | NP_001077378.1 | ||
XM_005252695.1 | XP_005252752.1 | |||
XM_017016779.1 | XP_016872268.1 | |||
AK124728.1 | ||||
AY181241.1 | AAO27353.1 | |||
BG818167.1 | ||||
CB045391.1 | ||||
DA208698.1 | ||||
EF536972.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759793 | Chr.10:133030918 - 133619181 on Build GRCh38 | Gain+Loss | SPRN SPRNP1 ECHS1 CYP2E1 ADGRA1 UTF1 MIR202 ADGRA1-AS1 ZNF511 VENTX TUBGCP2 SCART1 MIR3944 MTG1 ADAM8 PRAP1 MIR202HG CALY SYCE1 FUOM PAOX KNDC1 |
dgv998n100 | Chr.10:132998894 - 133170978 on Build GRCh38 | Gain | ADGRA1 ADGRA1-AS1 KNDC1 |
esv3625022 | Chr.10:132998655 - 133120915 on Build GRCh38 | Gain | ADGRA1 ADGRA1-AS1 |
esv3625015 | Chr.10:132889012 - 133114687 on Build GRCh38 | Gain | LINC01167 ADGRA1 ADGRA1-AS1 LINC01166 LINC01168 CFAP46 |
nsv470979 | Chr.10:133033478 - 133118280 on Build GRCh38 | Loss | ADGRA1 ADGRA1-AS1 |
nsv552526 | Chr.10:132699017 - 133103793 on Build GRCh38 | Gain | LINC01167 ADGRA1 INPP5A ADGRA1-AS1 LINC01166 LINC01168 NKX6-2 CFAP46 |
nsv552540 | Chr.10:133085338 - 133102541 on Build GRCh38 | Loss | ADGRA1 ADGRA1-AS1 |
nsv552539 | Chr.10:133061918 - 133103793 on Build GRCh38 | Loss | ADGRA1 ADGRA1-AS1 |
nsv467498 | Chr.10:132900981 - 133134139 on Build GRCh38 | Gain | LINC01167 ADGRA1 ADGRA1-AS1 LINC01166 LINC01168 CFAP46 |
nsv1054934 | Chr.10:130334322 - 133158679 on Build GRCh38 | Gain | LINC01167 PPP2R2D ADGRA1 INPP5A MIR378C ADGRA1-AS1 LRRC27 LINC01166 STK32C DPYSL4 CFAP46 BNIP3 JAKMIP3 TCERG1L-AS1 C10orf91 TCERG1L LINC01164 LOC105378568 LINC01168 PWWP2B NKX6-2 LOC107984282 |
nsv528260 | Chr.10:132859348 - 133620799 on Build GRCh38 | Loss | SPRN SPRNP1 MIR202 ADGRA1-AS1 ZNF511 VENTX SCART1 CFAP46 SYCE1 FUOM LINC01167 ECHS1 CYP2E1 ADGRA1 UTF1 LINC01166 TUBGCP2 MIR3944 MTG1 ADAM8 PRAP1 MIR202HG CALY LINC01168 PAOX KNDC1 |
nsv832036 | Chr.10:133089509 - 133368232 on Build GRCh38 | Loss | ECHS1 ADGRA1 UTF1 MIR202 ZNF511 VENTX TUBGCP2 ADAM8 PRAP1 MIR202HG CALY FUOM KNDC1 |
nsv952703 | Chr.10:133037897 - 133143896 on Build GRCh38 | Deletion | ADGRA1 ADGRA1-AS1 |
More Information
Additional Information:
For this assay, SNP(s) [rs116705421] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |