Assay Details
Target Gene Details
Entrez Gene ID: | 10555 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
Gene Aliases: |
1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta |
Location: |
Chr.9:136673143-136687459 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT2 | NM_001012727.1 | NP_001012745.1 | ||
NM_006412.3 | NP_006403.2 | |||
AF000237.1 | AAC51649.1 | |||
AF011374.1 | AAB64299.1 | |||
BC000026.2 | AAH00026.1 | |||
BC004529.2 | AAH04529.1 | |||
BC019292.1 | AAH19292.1 | |||
BF347518.1 | ||||
CN407343.1 | ||||
U56418.2 | AAB58776.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv13005n54 | Chr.9:136605258 - 136696482 on Build GRCh38 | Loss | HSPC324 AGPAT2 MIR126 LINC01451 EGFL7 |
nsv509334 | Chr.9:136514168 - 136724663 on Build GRCh38 | Insertion | HSPC324 MIR4673 SNHG7 FAM69B NALT1 MIR4674 AGPAT2 MIR126 NOTCH1 LINC01451 EGFL7 |
nsv951203 | Chr.9:136562849 - 136770848 on Build GRCh38 | Deletion | FAM69B LCN10 MIR126 LCN8 LOC100128593 LCN6 SNORA17B EGFL7 HSPC324 SNORA17A SNHG7 LCN15 AGPAT2 MIR6722 LINC01451 |
nsv469918 | Chr.9:136359865 - 137173890 on Build GRCh38 | Loss | DNLZ C9orf163 ABCA2 PHPT1 PMPCA TRAF2 LOC100128593 MAN1B1 NOTCH1 SNORA17B EGFL7 MIR4292 LRRC26 MIR4674 GRIN1 LINC01451 C9orf172 TMEM141 MIR126 LCN8 DPP7 C8G PTGDS CLIC3 PRR31 LCN15 EDF1 MIR6722 MIR4479 C9orf142 MIR4673 ENTPD2 C9orf139 NALT1 MIR3621 FBXW5 LCN12 HSPC324 SNORA17A MAN1B1-AS1 RABL6 TMEM210 INPP5E LOC101930307 CCDC183 AGPAT2 NPDC1 SNAPC4 SAPCD2 FAM69B LCNL1 LCN10 LCN6 MAMDC4 SNHG7 FUT7 UAP1L1 CCDC183-AS1 SEC16A CARD9 SDCCAG3 |
esv2759720 | Chr.9:136356377 - 136932033 on Build GRCh38 | Loss | MIR4673 DNLZ C9orf163 PHPT1 NALT1 PMPCA TRAF2 LOC100128593 NOTCH1 SNORA17B EGFL7 MIR4292 HSPC324 SNORA17A RABL6 INPP5E MIR4674 CCDC183 AGPAT2 SNAPC4 LINC01451 C9orf172 FAM69B TMEM141 LCN10 MIR126 LCN8 LCN6 GPSM1 MAMDC4 SNHG7 CCDC183-AS1 LCN15 EDF1 SEC16A MIR6722 MIR4479 CARD9 SDCCAG3 |
nsv8579 | Chr.9:136505432 - 136760256 on Build GRCh38 | Gain | MIR4673 FAM69B NALT1 LCN10 MIR126 LCN8 LOC100128593 LCN6 NOTCH1 SNORA17B EGFL7 HSPC324 SNORA17A SNHG7 LCN15 MIR4674 AGPAT2 MIR6722 LINC01451 |
nsv1053781 | Chr.9:136590694 - 136722927 on Build GRCh38 | Gain | HSPC324 FAM69B AGPAT2 MIR126 LINC01451 EGFL7 |
dgv957n27 | Chr.9:136619086 - 136725859 on Build GRCh38 | Loss | HSPC324 SNHG7 FAM69B AGPAT2 MIR126 EGFL7 |
esv2422220 | Chr.9:136584135 - 137350098 on Build GRCh38 | Deletion | ABCA2 PHPT1 TRAF2 LOC100128593 NELFB MAN1B1 CYSRT1 SNORA17B EGFL7 MIR4292 LRRC26 RNF208 GRIN1 SSNA1 EXD3 LINC01451 TMEM203 C9orf172 STPG3 TUBB4B TMEM141 MIR126 LCN8 DPP7 C8G PTGDS CLIC3 PRR31 LCN15 TPRN EDF1 MIR6722 MIR4479 C9orf142 ENTPD2 C9orf139 ANAPC2 MIR3621 FBXW5 FAM166A LCN12 HSPC324 SNORA17A MAN1B1-AS1 RABL6 TMEM210 LOC101930307 CCDC183 AGPAT2 NPDC1 SLC34A3 SAPCD2 FAM69B LCNL1 RNF224 C9orf173-AS1 LCN10 LCN6 TOR4A MAMDC4 SNHG7 FUT7 UAP1L1 CCDC183-AS1 NRARP NDOR1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |