Assay Details
Target Gene Details
Entrez Gene ID: | 6505 |
Gene Name: | solute carrier family 1 member 1 |
Gene Aliases: |
DCBXA, EAAC1, EAAT3, SCZD18 |
Location: |
Chr.9:4490427-4587469 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC1A1 | NM_004170.5 | NP_004161.4 | ||
XM_011518007.1 | XP_011516309.1 | |||
XM_011518010.1 | XP_011516312.1 | |||
XM_017015042.1 | XP_016870531.1 | |||
XM_017015043.1 | XP_016870532.1 | |||
AB008536.1 | BAB83767.1 | |||
AK313013.1 | ||||
BC033040.1 | AAH33040.1 | |||
DA643262.1 | ||||
U03506.1 | AAA50430.1 | |||
U06469.1 | AAA53215.1 | |||
U08989.1 | AAA68628.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv818673 | Chr.9:4499426 - 4502575 on Build GRCh38 | Loss |
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nsv1016929 | Chr.9:4219016 - 4545685 on Build GRCh38 | Gain |
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esv2656609 | Chr.9:4501099 - 4503946 on Build GRCh38 | Deletion |
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esv3619347 | Chr.9:4501055 - 4503978 on Build GRCh38 | Loss |
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nsv1022870 | Chr.9:4416046 - 4611901 on Build GRCh38 | Loss |
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esv3619346 | Chr.9:4498485 - 4519865 on Build GRCh38 | Loss |
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esv22769 | Chr.9:4501098 - 4503959 on Build GRCh38 | Loss |
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nsv524574 | Chr.9:4219259 - 4543307 on Build GRCh38 | Gain |
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esv3891532 | Chr.9:4499361 - 4515982 on Build GRCh38 | Gain |
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nsv1022493 | Chr.9:4490134 - 4604192 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs72687853] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)