Assay Details
Target Gene Details
Entrez Gene ID: | 6542 |
Gene Name: | solute carrier family 7 member 2 |
Gene Aliases: |
ATRC2, CAT2, HCAT2 |
Location: |
Chr.8:17494349-17570568 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC7A2 | NM_001008539.3 | NP_001008539.3 | ||
XM_005273610.4 | XP_005273667.1 | |||
XM_005273611.4 | XP_005273668.1 | |||
XM_005273612.4 | XP_005273669.1 | |||
XM_017013746.1 | XP_016869235.1 | |||
XM_017013747.1 | XP_016869236.1 | |||
AA724796.1 | ||||
AI458117.1 | ||||
AK314287.1 | ||||
AU077312.1 | ||||
DB237902.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3616489 | Chr.8:17490020 - 17737549 on Build GRCh38 | Loss |
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nsv831246 | Chr.8:17430363 - 17621085 on Build GRCh38 | Gain |
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nsv1024271 | Chr.8:17418630 - 17540313 on Build GRCh38 | Loss |
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esv3616490 | Chr.8:17490532 - 17587102 on Build GRCh38 | Loss |
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esv34867 | Chr.8:17488520 - 17725642 on Build GRCh38 | Loss |
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nsv516180 | Chr.8:17424902 - 17541640 on Build GRCh38 | Loss |
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esv2759600 | Chr.8:17433671 - 17784021 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs76467372] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)