Assay Details
Target Gene Details
Entrez Gene ID: | 81628 |
Gene Name: | TSC22 domain family member 4 |
Gene Aliases: |
THG-1, THG1, TILZ2 |
Location: |
Chr.7:100466519-100479279 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TSC22D4 | NM_001303043.1 | NP_001289972.1 | ||
NM_030935.4 | NP_112197.1 | |||
NR_130118.1 | ||||
NR_130119.1 | ||||
AJ133115.1 | CAB43491.1 | |||
AK296580.1 | ||||
AK297702.1 | ||||
AK314824.1 | ||||
BC001486.2 | AAH01486.1 | |||
BC001966.1 | AAH01966.1 | |||
BC002972.1 | AAH02972.1 | |||
BC010406.2 | AAH10406.1 | |||
BC031622.1 | AAH31622.1 | |||
BX341171.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2734888 | Chr.7:99975623 - 101290285 on Build GRCh38 | Deletion | PVRIG2P TSC22D4 ZCWPW1 NAT16 LAMTOR4 AZGP1P1 CLDN15 MIR93 FBXO24 STAG3L5P MEPCE PLOD3 PVRIG FIS1 PMS2P1 EPHB4 UFSP1 ZNHIT1 ZSCAN21 MUC3A LRCH4 MIR6875 C7orf61 NYAP1 GATS ZAN SERPINE1 TRIM56 GNB2 ZNF3 MOGAT3 MBLAC1 POP7 TFR2 ACTL6B COPS6 CNPY4 MUC12 TAF6 MIR25 MIR106B AGFG2 GAL3ST4 PCOLCE MIR6840 STAG3L5P-PVRIG2P-PILRB STAG3 VGF PPP1R35 SRRT LOC105375429 ZKSCAN1 ACHE SLC12A9 MIR4658 SPDYE3 PILRB ZASP PCOLCE-AS1 SAP25 PILRA TRIP6 C7orf43 MOSPD3 MIR4653 AZGP1 MUC17 GIGYF1 EPO AP4M1 MCM7 AP1S1 LOC102724094 GPC2 |
nsv527050 | Chr.7:100458543 - 100528352 on Build GRCh38 | Loss | TSC22D4 C7orf61 NYAP1 |
nsv831071 | Chr.7:100320402 - 100515790 on Build GRCh38 | Loss | MIR6840 STAG3L5P-PVRIG2P-PILRB PVRIG2P TSC22D4 C7orf61 PPP1R35 ZCWPW1 NYAP1 SPDYE3 STAG3L5P MEPCE PILRB PMS2P1 PILRA |
nsv951385 | Chr.7:100467278 - 100496477 on Build GRCh38 | Deletion | TSC22D4 NYAP1 |
More Information
Additional Information:
For this assay, SNP(s) [rs141615785] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |