Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | NP_001192183.1 | ||
NM_002538.3 | NP_002529.1 | |||
XM_017008913.1 | XP_016864402.1 | |||
XM_017008914.1 | XP_016864403.1 | |||
AK290697.1 | ||||
AK313501.1 | ||||
BC029886.1 | AAH29886.1 | |||
DB226845.1 | ||||
U49184.1 | AAC50451.1 | |||
U53823.1 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | LOC101928924 OCLN GTF2H2C LOC728488 GUSBP3 |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | LOC101928924 CDK7 GTF2H2 SMN1 SERF1B LOC107986351 LOC101929599 SMN2 RAD17 GTF2H2C LOC728488 MARVELD2 SMA4 TAF9 GTF2H2B AK6 NAIP CCDC125 LOC107986354 GUSBP3 LOC653080 LOC647859 LOC441081 LOC728526 SMA5 OCLN SERF1A |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | LOC101928924 OCLN GTF2H2C |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | LOC101928924 GTF2H2 SMN1 PMCHL2 SERF1B LOC107986351 LOC101929599 SMN2 RAD17 GTF2H2C LOC728488 BDP1 MARVELD2 SMA4 TAF9 GTF2H2B LOC107986353 AK6 NAIP LOC107986354 LOC102724392 GUSBP3 LOC653080 LOC647859 LOC441081 LOC728526 LOC107986352 GUSBP9 SMA5 OCLN SERF1A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |