Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | NP_001192183.1 | ||
NM_002538.3 | NP_002529.1 | |||
XM_017008913.1 | XP_016864402.1 | |||
XM_017008914.1 | XP_016864403.1 | |||
AK290697.1 | ||||
AK313501.1 | ||||
BC029886.1 | AAH29886.1 | |||
DB226845.1 | ||||
U49184.1 | AAC50451.1 | |||
U53823.1 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | OCLN LOC101928924 |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | OCLN LOC101928924 LOC728488 GUSBP3 GTF2H2C |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | CCDC125 LOC107986354 CDK7 AK6 OCLN LOC728526 GTF2H2C NAIP LOC647859 GTF2H2 LOC441081 SMN2 SMA5 RAD17 LOC101928924 GUSBP3 SERF1B MARVELD2 SERF1A SMA4 LOC653080 GTF2H2B LOC101929599 TAF9 LOC728488 SMN1 LOC107986351 |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | OCLN LOC101928924 GTF2H2C |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | LOC107986354 BDP1 AK6 OCLN LOC728526 LOC107986352 GTF2H2C PMCHL2 NAIP LOC647859 GTF2H2 LOC441081 SMN2 SMA5 RAD17 LOC101928924 GUSBP3 SERF1B MARVELD2 GUSBP9 SERF1A LOC107986353 SMA4 LOC653080 GTF2H2B LOC101929599 TAF9 LOC728488 SMN1 LOC102724392 LOC107986351 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |