Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | NP_001192183.1 | ||
NM_001205255.1 | NP_001192184.1 | |||
NM_002538.3 | NP_002529.1 | |||
XM_017008913.1 | XP_016864402.1 | |||
XM_017008914.1 | XP_016864403.1 | |||
AB451306.1 | ||||
AB451437.1 | ||||
AK290697.1 | ||||
AK313501.1 | ||||
BC029886.1 | AAH29886.1 | |||
DB226845.1 | ||||
FJ786083.1 | ||||
FJ786084.1 | ||||
GQ225096.1 | ||||
GQ225097.1 | ||||
GQ225098.1 | ||||
GQ402517.1 | ||||
U49184.1 | AAC50451.1 | |||
U53823.1 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | LOC101928924 OCLN LOC728488 GTF2H2C GUSBP3 |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | TAF9 LOC728488 CDK7 SMA4 SERF1A GTF2H2 LOC728526 LOC441081 GTF2H2C GTF2H2B GUSBP3 LOC101928924 SMN1 MARVELD2 AK6 CCDC125 SMN2 NAIP LOC101929599 SERF1B SMA5 LOC107986354 OCLN LOC647859 RAD17 LOC107986351 LOC653080 |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | LOC101928924 OCLN GTF2H2C |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | TAF9 LOC728488 SMA4 SERF1A LOC102724392 GTF2H2 LOC728526 LOC441081 LOC107986352 GTF2H2C GTF2H2B GUSBP3 GUSBP9 LOC101928924 SMN1 MARVELD2 AK6 SMN2 LOC107986353 NAIP LOC101929599 SERF1B SMA5 LOC107986354 OCLN LOC647859 RAD17 LOC107986351 LOC653080 BDP1 PMCHL2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |