Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | NP_001192183.1 | ||
NM_002538.3 | NP_002529.1 | |||
XM_017008913.1 | XP_016864402.1 | |||
XM_017008914.1 | XP_016864403.1 | |||
AK290697.1 | ||||
AK313501.1 | ||||
BC029886.1 | AAH29886.1 | |||
DB226845.1 | ||||
U49184.1 | AAC50451.1 | |||
U53823.1 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | LOC101928924 GTF2H2C OCLN GUSBP3 LOC728488 |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | LOC441081 CDK7 NAIP LOC728488 AK6 LOC647859 SERF1A LOC107986354 LOC653080 CCDC125 SMA5 GTF2H2 SMN2 TAF9 MARVELD2 GTF2H2B RAD17 LOC101928924 GTF2H2C LOC107986351 SMN1 LOC728526 SERF1B OCLN SMA4 GUSBP3 LOC101929599 |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | LOC101928924 GTF2H2C OCLN |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | LOC441081 PMCHL2 NAIP LOC728488 AK6 LOC647859 LOC107986352 SERF1A LOC107986354 LOC653080 GUSBP9 SMA5 GTF2H2 SMN2 TAF9 MARVELD2 BDP1 LOC102724392 GTF2H2B RAD17 LOC101928924 GTF2H2C LOC107986351 SMN1 LOC728526 SERF1B LOC107986353 OCLN SMA4 GUSBP3 LOC101929599 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |