Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | NP_001192183.1 | ||
NM_002538.3 | NP_002529.1 | |||
XM_017008913.1 | XP_016864402.1 | |||
XM_017008914.1 | XP_016864403.1 | |||
AK290697.1 | ||||
AK313501.1 | ||||
BC029886.1 | AAH29886.1 | |||
DB226845.1 | ||||
U49184.1 | AAC50451.1 | |||
U53823.1 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | GTF2H2C LOC101928924 GUSBP3 LOC728488 OCLN |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | LOC728526 LOC441081 GTF2H2C SMA5 TAF9 GTF2H2B SMN2 GTF2H2 SMA4 LOC107986351 NAIP CDK7 LOC647859 SMN1 MARVELD2 LOC653080 LOC101928924 GUSBP3 LOC101929599 RAD17 OCLN AK6 SERF1B LOC107986354 CCDC125 LOC728488 SERF1A |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | GTF2H2C LOC101928924 OCLN |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | LOC728526 LOC441081 GTF2H2C SMA5 TAF9 GTF2H2B SMN2 GTF2H2 SMA4 LOC107986353 GUSBP9 LOC107986351 PMCHL2 NAIP LOC647859 SMN1 MARVELD2 LOC653080 LOC101928924 GUSBP3 LOC101929599 LOC102724392 RAD17 OCLN BDP1 LOC107986352 AK6 SERF1B LOC107986354 LOC728488 SERF1A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |