Hs03528248_cn

• Gene Symbol: CCSER1
• Assay Reference Genome Location: Chr.4:90151122 on build GRCh38
• Cytoband: 4q22.1

Target Gene Details

• Entrez Gene ID: 401145
• Gene Name: coiled-coil serine rich protein 1
• Gene Aliases: FAM190A
• Location: Chr.4:90127394-91602219 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCSER1	NM_001145065.1			NP_001138537.1
	XM_011531936.1			XP_011530238.1
	XM_011531938.2			XP_011530240.1
	XM_011531941.2			XP_011530243.1
	XM_011531942.2			XP_011530244.1
	XM_011531943.2			XP_011530245.1
	XM_011531945.1			XP_011530247.1
	XM_011531946.2			XP_011530248.1
	XM_011531947.2			XP_011530249.1
	XM_011531948.1			XP_011530250.1
	XM_011531949.2			XP_011530251.1
	XM_011531950.2			XP_011530252.1
	XM_011531951.2			XP_011530253.1
	XM_011531955.2			XP_011530257.1
	XM_011531956.2			XP_011530258.1
	XM_011531957.2			XP_011530259.1
	XM_011531958.2			XP_011530260.1
	XM_017008194.1			XP_016863683.1
	XM_017008195.1			XP_016863684.1
	XM_017008196.1			XP_016863685.1
	XM_017008197.1			XP_016863686.1
	XM_017008198.1			XP_016863687.1
	XM_017008199.1			XP_016863688.1
	XM_017008200.1			XP_016863689.1
	XM_017008201.1			XP_016863690.1
	XM_017008202.1			XP_016863691.1
	AB051467.1
	AK097436.1
	AK310825.1
	DB027029.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830006	Chr.4:90050505 - 90265189 on Build GRCh38	Loss	CCSER1
nsv470053	Chr.4:89958462 - 90518422 on Build GRCh38	Gain	CCSER1
nsv1012406	Chr.4:89246630 - 90245636 on Build GRCh38	Loss	SNCA-AS1 SNCA MMRN1 CCSER1 GPRIN3
nsv594806	Chr.4:88621130 - 90539537 on Build GRCh38	Gain	SNCA-AS1 NAP1L5 SNCA MMRN1 CCSER1 TIGD2 GPRIN3 FAM13A-AS1 HERC3 FAM13A

More Information

Additional Information:

For this assay, SNP(s) [rs115654566] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation