Genomic Map
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Target Gene Details
Entrez Gene ID: | 94031 |
Gene Name: | HtrA serine peptidase 3 |
Gene Aliases: |
Prsp, Tasp |
Location: |
Chr.4:8269757-8307111 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| HTRA3 | NM_001297559.1 | NP_001284488.1 | ||
| NM_053044.4 | NP_444272.1 | |||
| XM_011513596.2 | XP_011511898.1 | |||
| AL547377.3 | ||||
| AY040094.2 | AAK71475.2 | |||
| AY280665.1 | AAP42282.1 | |||
| AY280666.1 | AAP42283.1 | |||
| BC034390.1 | AAH34390.1 | |||
| BC035717.1 | AAH35717.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv593627 | Chr.4:8200484 - 8309316 on Build GRCh38 | Gain |
 HTRA3
SH3TC1
|
| dgv8957n54 | Chr.4:8269524 - 8278313 on Build GRCh38 | Gain |
HTRA3
|
| nsv829853 | Chr.4:8170338 - 8319141 on Build GRCh38 | Gain+Loss |
HTRA3
SH3TC1
|
| nsv461218 | Chr.4:8253057 - 8318399 on Build GRCh38 | Loss |
HTRA3
|
| nsv461216 | Chr.4:8152807 - 8274684 on Build GRCh38 | Loss |
ABLIM2
HTRA3
SH3TC1
|
| nsv949784 | Chr.4:8163674 - 8297873 on Build GRCh38 | Deletion |
HTRA3
SH3TC1
|
| nsv1002794 | Chr.4:8108356 - 8489207 on Build GRCh38 | Gain |
TRMT44
ABLIM2
HTRA3
SH3TC1
ACOX3
|
| esv3575676 | Chr.4:8264103 - 8287326 on Build GRCh38 | Gain |
HTRA3
|
| nsv1009011 | Chr.4:8223942 - 8423104 on Build GRCh38 | Loss |
HTRA3
SH3TC1
ACOX3
|
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Additional Information:
For this assay, SNP(s) [rs114516183] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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