Assay Details
Target Gene Details
Entrez Gene ID: | 10991 |
Gene Name: | solute carrier family 38 member 3 |
Gene Aliases: |
G17, NAT1, SN1, SNAT3 |
Location: |
Chr.3:50205246-50220979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A3 | NM_006841.5 | NP_006832.1 | ||
AF244548.1 | AAG15313.1 | |||
AK293801.1 | ||||
AK299677.1 | ||||
AK313461.1 | ||||
BC042875.1 | AAH42875.1 | |||
BP362985.1 | ||||
BX537382.1 | CAD97624.1 | |||
U49082.1 | AAB47236.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759148 | Chr.3:50161045 - 50333946 on Build GRCh38 | Loss | LSMEM2 NAT6 SEMA3B-AS1 IFRD2 HYAL1 GNAI2 SLC38A3 TUSC2 RASSF1 MIR5787 HYAL3 MIR566 SEMA3B SEMA3F GNAT1 MIR6872 HYAL2 |
nsv523560 | Chr.3:50134964 - 50314769 on Build GRCh38 | Loss | LSMEM2 NAT6 SEMA3B-AS1 IFRD2 HYAL1 GNAI2 SLC38A3 MIR5787 LOC107986035 HYAL3 MIR566 SEMA3B SEMA3F GNAT1 MIR6872 SEMA3F-AS1 |
dgv602n27 | Chr.3:50140578 - 50287241 on Build GRCh38 | Loss | LOC107986035 LSMEM2 SEMA3B-AS1 GNAI2 MIR566 SLC38A3 SEMA3B SEMA3F GNAT1 MIR6872 MIR5787 SEMA3F-AS1 |
nsv834692 | Chr.3:50161052 - 50356033 on Build GRCh38 | Loss | LSMEM2 NAT6 SEMA3B-AS1 IFRD2 HYAL1 GNAI2 SLC38A3 TUSC2 RASSF1 MIR5787 RASSF1-AS1 TMEM115 HYAL3 NPRL2 MIR566 SEMA3B SEMA3F GNAT1 MIR6872 ZMYND10 CYB561D2 HYAL2 |
dgv8316n54 | Chr.3:50115923 - 50299991 on Build GRCh38 | Loss | LSMEM2 NAT6 SEMA3B-AS1 IFRD2 HYAL1 GNAI2 SLC38A3 RBM5 MIR5787 LOC107986035 HYAL3 MIR566 SEMA3B SEMA3F GNAT1 MIR6872 SEMA3F-AS1 |
nsv515986 | Chr.3:50066874 - 50254353 on Build GRCh38 | Loss | LOC107986035 GNAI2 MIR566 SLC38A3 SEMA3F GNAT1 RBM6 RBM5 RBM5-AS1 MIR5787 SEMA3F-AS1 |
nsv470561 | Chr.3:50121341 - 50547568 on Build GRCh38 | Loss | LSMEM2 TUSC2 RASSF1 LOC107986035 RASSF1-AS1 TMEM115 HYAL3 NPRL2 MIR566 SEMA3B SEMA3F ZMYND10 SEMA3F-AS1 CYB561D2 NAT6 SEMA3B-AS1 IFRD2 HYAL1 GNAI2 CACNA2D2 SLC38A3 MIR5787 GNAT1 MIR6872 HYAL2 |
nsv523662 | Chr.3:50107518 - 50547568 on Build GRCh38 | Loss | LSMEM2 TUSC2 RASSF1 LOC107986035 RASSF1-AS1 TMEM115 HYAL3 NPRL2 MIR566 SEMA3B SEMA3F ZMYND10 SEMA3F-AS1 CYB561D2 NAT6 SEMA3B-AS1 IFRD2 HYAL1 GNAI2 CACNA2D2 SLC38A3 RBM5 MIR5787 GNAT1 MIR6872 HYAL2 |
nsv834690 | Chr.3:50064402 - 50263192 on Build GRCh38 | Loss | LOC107986035 GNAI2 MIR566 SLC38A3 SEMA3F GNAT1 RBM6 RBM5 RBM5-AS1 MIR5787 SEMA3F-AS1 |
nsv954855 | Chr.3:50152468 - 50439169 on Build GRCh38 | Deletion | LSMEM2 TUSC2 RASSF1 LOC107986035 RASSF1-AS1 TMEM115 HYAL3 NPRL2 MIR566 SEMA3B SEMA3F ZMYND10 SEMA3F-AS1 CYB561D2 NAT6 SEMA3B-AS1 IFRD2 HYAL1 GNAI2 CACNA2D2 SLC38A3 MIR5787 GNAT1 MIR6872 HYAL2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |