Assay Details
Target Gene Details
Entrez Gene ID: | 130916 |
Gene Name: | mitochondrial transcription termination factor 4 |
Gene Aliases: |
MTERFD2 |
Location: |
Chr.2:241072168-241103367 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MTERF4 | XM_017003385.1 | 9 | 5458 | XP_016858874.1 |
AK126322.1 | 1 | 2233 |
Target Gene Details
Entrez Gene ID: | 25992 |
Gene Name: | sushi, nidogen and EGF like domains 1 |
Gene Aliases: |
SST3, Snep |
Location: |
Chr.2:240997409-241095568 on Build GRCh38 |
Assay Gene Location: | Within Intron 32 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SNED1 | NM_001080437.1 | NP_001073906.1 | ||
XM_011510931.2 | XP_011509233.1 | |||
XM_011510932.2 | XP_011509234.1 | |||
XM_011510933.2 | XP_011509235.1 | |||
XM_017003773.1 | XP_016859262.1 | |||
XM_017003774.1 | XP_016859263.1 | |||
XM_017003775.1 | XP_016859264.1 | |||
XM_017003776.1 | XP_016859265.1 | |||
XM_017003777.1 | XP_016859266.1 | |||
XM_017003778.1 | XP_016859267.1 | |||
XM_017003779.1 | XP_016859268.1 | |||
XM_017003780.1 | XP_016859269.1 | |||
XM_017003781.1 | XP_016859270.1 | |||
XM_017003782.1 | XP_016859271.1 | |||
AF439717.1 | AAQ04558.1 | |||
AF439718.1 | 7 | 1205 | AAQ04563.1 | |
AK074062.1 | BAB84888.1 | |||
AK074075.1 | BAB84901.1 | |||
AL833363.1 | 2 | 1984 | ||
BC027939.1 | AAH27939.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv955298 | Chr.2:241061384 - 241078185 on Build GRCh38 | Deletion | MTERF4 SNED1 |
esv3584392 | Chr.2:241063033 - 241077461 on Build GRCh38 | Loss | MTERF4 SNED1 |
More Information
Additional Information:
For this assay, SNP(s) [rs75096118] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |