Assay Details
Target Gene Details
Entrez Gene ID: | 7161 |
Gene Name: | tumor protein p73 |
Gene Aliases: |
P73 |
Location: |
Chr.1:3652565-3736201 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TP73 | NM_001204184.1 | NP_001191113.1 | ||
NM_001204185.1 | NP_001191114.1 | |||
NM_001204186.1 | NP_001191115.1 | |||
NM_001204187.1 | NP_001191116.1 | |||
NM_001204188.1 | NP_001191117.1 | |||
NM_005427.3 | NP_005418.1 | |||
BC117251.1 | ||||
BC117253.1 | ||||
Y11416.1 | CAA72220.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv470687 | Chr.1:3356499 - 3763210 on Build GRCh38 | Loss | MIR551A CCDC27 PRDM16 WRAP73 MEGF6 TP73-AS1 TP73 ARHGEF16 TPRG1L |
nsv545128 | Chr.1:3630371 - 3700037 on Build GRCh38 | Loss | WRAP73 TP73 |
nsv1001715 | Chr.1:3627619 - 3769754 on Build GRCh38 | Loss | CCDC27 WRAP73 TP73-AS1 TP73 TPRG1L |
esv3585042 | Chr.1:3585575 - 4260083 on Build GRCh38 | Gain | CEP104 SMIM1 MEGF6 TPRG1L C1orf174 CCDC27 LRRC47 WRAP73 DFFB LINC01134 LINC01346 TP73-AS1 TP73 |
nsv1012423 | Chr.1:3477686 - 4747449 on Build GRCh38 | Gain | MIR551A CEP104 SMIM1 MEGF6 ARHGEF16 TPRG1L LOC284661 AJAP1 C1orf174 CCDC27 LRRC47 WRAP73 DFFB LINC01134 LINC01346 TP73-AS1 TP73 |
nsv951959 | Chr.1:3051037 - 3812036 on Build GRCh38 | Deletion | MIR551A LOC105378604 LINC00982 SMIM1 MEGF6 MIR4251 ARHGEF16 TPRG1L CCDC27 PRDM16 LRRC47 WRAP73 TP73-AS1 TP73 |
nsv830314 | Chr.1:3660776 - 3804275 on Build GRCh38 | Gain+Loss | CCDC27 LRRC47 SMIM1 TP73-AS1 TP73 |
esv3585045 | Chr.1:3611161 - 3686920 on Build GRCh38 | Gain | WRAP73 MEGF6 TP73 TPRG1L |
dgv8e212 | Chr.1:3669347 - 3673132 on Build GRCh38 | Loss | TP73 |
esv2758916 | Chr.1:3668477 - 3738972 on Build GRCh38 | Gain | TP73-AS1 TP73 |
More Information
Additional Information:
For this assay, SNP(s) [rs74910150] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |