Assay Details
Target Gene Details
Entrez Gene ID: | 4034 |
Gene Name: | leucine rich repeats and calponin homology domain containing 4 |
Gene Aliases: |
LRN, LRRN1, LRRN4, PP14183 |
Location: |
Chr.7:100574011-100586188 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 17 - Exon 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LRCH4 | NM_001289934.1 | NP_001276863.1 | ||
NM_002319.4 | NP_002310.2 | |||
AF459638.1 | AAQ04768.1 | |||
AI491709.1 | ||||
AK074833.1 | ||||
AK097420.1 | ||||
AK128189.1 | ||||
BC007634.1 | AAH07634.1 | |||
BC018529.1 | AAH18529.3 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv607932 | Chr.7:100574872 - 100585068 on Build GRCh38 | Loss | LRCH4 FBXO24 |
esv2734888 | Chr.7:99975623 - 101290285 on Build GRCh38 | Deletion | MEPCE STAG3 MUC17 AZGP1P1 MOGAT3 PPP1R35 MIR6875 POP7 AP1S1 STAG3L5P-PVRIG2P-PILRB PMS2P1 LOC105375429 MIR106B TAF6 TSC22D4 AZGP1 FIS1 TRIP6 PCOLCE CLDN15 EPO C7orf43 MIR6840 LRCH4 GNB2 LAMTOR4 C7orf61 TRIM56 CNPY4 MBLAC1 MIR4653 ZAN VGF EPHB4 PLOD3 ZNF3 MCM7 COPS6 ZASP ZKSCAN1 MIR93 ZNHIT1 ACTL6B NYAP1 STAG3L5P MUC3A MUC12 UFSP1 MOSPD3 PILRB AGFG2 PILRA PVRIG2P MIR4658 PCOLCE-AS1 PVRIG SRRT AP4M1 GAL3ST4 SAP25 SLC12A9 GPC2 MIR25 GIGYF1 GATS FBXO24 ACHE ZCWPW1 ZSCAN21 NAT16 LOC102724094 SPDYE3 SERPINE1 TFR2 |
nsv951386 | Chr.7:100566478 - 100682977 on Build GRCh38 | Deletion | PCOLCE-AS1 LRCH4 GNB2 ACTL6B SAP25 GIGYF1 FBXO24 LOC105375429 PCOLCE MOSPD3 AGFG2 ZASP TFR2 |
nsv831072 | Chr.7:100564880 - 100765212 on Build GRCh38 | Loss | PCOLCE-AS1 LRCH4 GNB2 POP7 ACTL6B SAP25 GIGYF1 FBXO24 LOC105375429 ZAN PCOLCE MOSPD3 EPO AGFG2 ZASP TFR2 |
nsv5868 | Chr.7:100572375 - 100617023 on Build GRCh38 | Deletion | PCOLCE-AS1 LRCH4 SAP25 PCOLCE MOSPD3 FBXO24 ZASP |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |