Assay Details
Target Gene Details
Entrez Gene ID: | 54822 |
Gene Name: | transient receptor potential cation channel subfamily M member 7 |
Gene Aliases: |
ALSPDC, CHAK, CHAK1, LTRPC7, LTrpC-7, TRP-PLIK |
Location: |
Chr.15:50557158-50686835 on Build GRCh38 |
Assay Gene Location: | Within Exon 43 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRPM7 | NM_001301212.1 | 39 | 6672 | NP_001288141.1 |
NM_017672.5 | 39 | 6675 | NP_060142.3 | |
XM_005254486.3 | 40 | 6730 | XP_005254543.1 | |
XM_017022350.1 | 40 | 6495 | XP_016877839.1 | |
XM_017022351.1 | 40 | 6492 | XP_016877840.1 | |
XM_017022352.1 | 39 | 6435 | XP_016877841.1 | |
XM_017022353.1 | 39 | 6432 | XP_016877842.1 | |
XM_017022354.1 | 40 | 6560 | XP_016877843.1 | |
XM_017022355.1 | 38 | 6362 | XP_016877844.1 | |
AF346629.2 | 39 | 6628 | AAK19738.2 | |
AK075193.1 | 5 | 1380 | BAC11462.1 | |
AK172800.1 | 16 | 3120 | BAD18773.1 | |
AY032950.1 | 39 | 6664 | AAK44211.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1050385 | Chr.15:50551298 - 50657601 on Build GRCh38 | Gain | TRPM7 |
nsv471242 | Chr.15:50478671 - 50892386 on Build GRCh38 | Gain | SPPL2A TRPM7 USP50 USP8 |
nsv524613 | Chr.15:50364252 - 50576582 on Build GRCh38 | Loss | TRPM7 USP50 USP8 |
nsv569398 | Chr.15:50496928 - 51002798 on Build GRCh38 | Loss | SPPL2A TRPM7 AP4E1 USP50 USP8 DCAF13P3 |
nsv1047443 | Chr.15:50452584 - 51354826 on Build GRCh38 | Gain | MIR4713 AP4E1 MIR7973-1 PIRC66 USP8 SPPL2A TRPM7 TNFAIP8L3 USP50 MIR7973-2 GLDN CYP19A1 DCAF13P3 |
dgv2594n100 | Chr.15:50469213 - 50823338 on Build GRCh38 | Gain | SPPL2A TRPM7 USP50 USP8 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |