Assay Details
Target Gene Details
Entrez Gene ID: | 126133 |
Gene Name: | aldehyde dehydrogenase 16 family member A1 |
Gene Aliases: |
- |
Location: |
Chr.19:49453216-49471050 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 15 - Intron 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ALDH16A1 | NM_001145396.1 | NP_001138868.1 | ||
NM_153329.3 | NP_699160.2 | |||
XM_011526441.1 | XP_011524743.1 | |||
XM_011526442.1 | XP_011524744.1 | |||
AK074136.1 | BAB84962.1 | |||
AK297101.1 | ||||
AK298587.1 | ||||
AK301246.1 | ||||
AY007096.1 | ||||
BC014895.2 | AAH14895.2 | |||
BC042142.1 | AAH42142.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | SNAR-C2 SNAR-A11 FCGRT FAM83E CD37 SNAR-C5 PNKP SNAR-A8 SNORD34 SIGLEC11 ELSPBP1 PRMT1 GYS1 GRWD1 PLA2G4C CGB1 SPACA4 BCL2L12 KCNA7 FUT2 HRC TMEM143 MIR4324 ZNF473 MIR5088 LOC105447645 PTOV1-AS2 CCDC155 GRIN2D NTF4 MIR6800 EMP3 TEAD2 SNAR-A12 RASIP1 MIR150 DBP SNAR-A5 IZUMO1 SNAR-C1 CGB2 FTL RRAS PTOV1 CARD8 ADM5 ZNF114 MIR4750 GFY CA11 SNAR-C4 SNAR-A9 TRPM4 SNORD35A LOC101059948 MIR4749 PRRG2 SNAR-A10 SNAR-A4 RPL18 MAMSTR NTN5 SYNGR4 CGB8 KDELR1 SNORD32A BSPH1 LIN7B SLC17A7 PTH2 FLJ26850 HSD17B14 IRF3 TSKS PLA2G4C-AS1 PPP1R15A CYTH2 SULT2B1 NUCB1-AS1 SNORD33 SNORD35B DKKL1 SNAR-D SNAR-B1 AKT1S1 FGF21 BAX SNAR-G1 NUP62 RPS11 LOC105372430 SNAR-A6 PIH1D1 SNAR-A7 C19orf73 VRK3 LOC101928295 RUVBL2 CGB3 SNRNP70 TBC1D17 RPL13A LHB LIG1 PTOV1-AS1 CARD8-AS1 CABP5 LOC100287477 SPHK2 SNAR-B2 FUT1 MIR6798 CCDC114 PRR12 NOSIP FUZ SNAR-G2 CPT1C SNAR-C3 SNAR-A3 MIR6799 PLEKHA4 SNAR-A13 CGB7 AP2A1 FLT3LG ATF5 LMTK3 TULP2 MED25 KCNJ14 SNAR-A1 SEC1P NUCB1 SNAR-A14 IL4I1 ALDH16A1 MIR4751 SNAR-A2 SLC6A16 CGB5 PPFIA3 SCAF1 RCN3 SIGLEC16 C19orf68 DHDH BCAT2 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD33 SNORD35A FCGRT SNORD35B SNORD32A RPS11 PIH1D1 SNORD34 NOSIP ALDH16A1 MIR150 RPL13A RCN3 FLT3LG |
esv3644624 | Chr.19:49461676 - 49475440 on Build GRCh38 | Gain | ALDH16A1 FLT3LG |
nsv953599 | Chr.19:49386444 - 49506743 on Build GRCh38 | Deletion | SNORD33 SNORD35A SNORD35B SNORD32A SLC17A7 CCDC155 RPS11 PTH2 PIH1D1 SNORD34 GFY LOC101928295 ALDH16A1 MIR150 RPL13A FLT3LG |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |