Assay Details
Target Gene Details
Entrez Gene ID: | 6560 |
Gene Name: | solute carrier family 12 member 4 |
Gene Aliases: |
CTC-479C5.17, KCC1, hKCC1 |
Location: |
Chr.16:67943474-67968694 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 16 - Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC12A4 | NM_001145961.1 | NP_001139433.1 | ||
NM_001145962.1 | NP_001139434.1 | |||
NM_001145963.1 | NP_001139435.1 | |||
NM_001145964.1 | NP_001139436.1 | |||
NM_005072.4 | NP_005063.1 | |||
AF047338.1 | AAC32815.1 | |||
AF054505.1 | AAC39684.1 | |||
AF054506.1 | AAC39685.1 | |||
AK026911.1 | ||||
AK097808.1 | ||||
AK293906.1 | ||||
AK293956.1 | ||||
AK299042.1 | ||||
AK302790.1 | ||||
AK316415.1 | ||||
BC021193.2 | AAH21193.1 | |||
U55054.1 | AAC50563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | ENKD1 PARD6A LOC100131303 LRRC36 ATP6V0D1 GFOD2 EXOC3L1 TMEM208 CTRL LOC100505942 SLC9A5 PSMB10 LCAT HSD11B2 LOC105369155 AGRP TSNAXIP1 LRRC29 PLEKHG4 ACD DDX28 NUTF2 C16orf86 DUS2 HSF4 ELMO3 KIAA0895L NOL3 MIR328 FBXL8 THAP11 NRN1L ZDHHC1 PSKH1 CENPT EDC4 CARMIL2 FHOD1 SLC12A4 DPEP2 CTCF FAM65A TRADD E2F4 TPPP3 DPEP3 LOC107984813 RANBP10 KCTD19 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | ENKD1 PARD6A C16orf70 LOC100131303 LRRC36 ATP6V0D1 GFOD2 EXOC3L1 TMEM208 CTRL LOC100505942 SLC9A5 PSMB10 LCAT B3GNT9 HSD11B2 LOC105369155 AGRP TSNAXIP1 LRRC29 PLEKHG4 ACD DDX28 NUTF2 C16orf86 DUS2 HSF4 ELMO3 KIAA0895L NOL3 MIR328 FBXL8 THAP11 NRN1L ZDHHC1 PSKH1 CENPT EDC4 CARMIL2 FHOD1 SLC12A4 DPEP2 CTCF FAM65A TRADD E2F4 TPPP3 DPEP3 LOC107984813 RANBP10 KCTD19 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |