Assay Details
Target Gene Details
Entrez Gene ID: | 79869 |
Gene Name: | cleavage and polyadenylation specific factor 7 |
Gene Aliases: |
CFIm59 |
Location: |
Chr.11:61402648-61429992 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CPSF7 | NM_001136040.2 | 10 | 3292 | NP_001129512.1 |
NM_001142565.1 | 10 | 3265 | NP_001136037.1 | |
NM_024811.3 | 10 | 3368 | NP_079087.3 | |
XM_005274298.4 | 10 | 3351 | XP_005274355.1 | |
XM_005274299.4 | 10 | 3295 | XP_005274356.1 | |
XM_005274303.4 | 11 | 3323 | XP_005274360.1 | |
XM_011545257.2 | 11 | 3177 | XP_011543559.1 | |
XM_011545258.2 | 10 | 3249 | XP_011543560.1 | |
XM_011545259.2 | 10 | 3222 | XP_011543561.1 | |
XM_011545260.2 | 11 | 3369 | XP_011543562.1 | |
XM_011545261.2 | 11 | 3370 | XP_011543563.1 | |
XM_011545262.2 | 11 | 3316 | XP_011543564.1 | |
XM_011545263.2 | 11 | 3315 | XP_011543565.1 | |
XM_017018345.1 | 11 | 3150 | XP_016873834.1 | |
AK022591.1 | 5 | 2560 | BAB14118.1 | |
AK092037.1 | 11 | 3052 | ||
AK096343.1 | 10 | 3248 | ||
AL512759.1 | 4 | 2147 | CAC21678.1 | |
AL832546.1 | 8 | 2963 | ||
AL832667.1 | 10 | 3255 | ||
AL833332.1 | 10 | 3221 | ||
BC018135.1 | 10 | 3258 | AAH18135.1 | |
BX537888.1 | 10 | 3246 | CAD97884.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv520751 | Chr.11:61389584 - 61415916 on Build GRCh38 | Gain |
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nsv832178 | Chr.11:61402074 - 61573390 on Build GRCh38 | Gain+Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs117565407,rs139560333] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)