Hs02923447_cn

• Gene Symbol: PCDHGA1
• Assay Reference Genome Location: Chr.5:141372422 on build GRCh38
• Cytoband: 5q31.3

Target Gene Details

• Entrez Gene ID: 56114
• Gene Name: protocadherin gamma subfamily A, 1
• Gene Aliases: PCDH-GAMMA-A1
• Location: Chr.5:141330685-141512979 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA1	NM_018912.2			NP_061735.1
	AF152318.1			AAD43712.1

Target Gene Details

• Entrez Gene ID: 56113
• Gene Name: protocadherin gamma subfamily A, 2
• Gene Aliases: PCDH-GAMMA-A2
• Location: Chr.5:141338760-141512979 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA2	NM_018915.3			NP_061738.1
	AF152322.1			AAD43716.1

Target Gene Details

• Entrez Gene ID: 56112
• Gene Name: protocadherin gamma subfamily A, 3
• Gene Aliases: PCDH-GAMMA-A3
• Location: Chr.5:141344034-141512979 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA3	NM_018916.3			NP_061739.2
	AB208927.1			BAD92164.1
	AF152323.1			AAD43717.1

Target Gene Details

• Entrez Gene ID: 56111
• Gene Name: protocadherin gamma subfamily A, 4
• Gene Aliases: PCDH-GAMMA-A4
• Location: Chr.5:141355025-141512979 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA4	NM_018917.3			NP_061740.2
	AF152324.1			AAD43718.1

Target Gene Details

• Entrez Gene ID: 56110
• Gene Name: protocadherin gamma subfamily A, 5
• Gene Aliases: CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5
• Location: Chr.5:141364331-141512979 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGA5	NM_018918.2			NP_061741.1
	AF152325.1			AAD43719.1

Target Gene Details

• Entrez Gene ID: 56104
• Gene Name: protocadherin gamma subfamily B, 1
• Gene Aliases: PCDH-GAMMA-B1
• Location: Chr.5:141350261-141512979 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB1	NM_018922.2			NP_061745.1
	AF152330.1			AAD43724.1

Target Gene Details

• Entrez Gene ID: 56103
• Gene Name: protocadherin gamma subfamily B, 2
• Gene Aliases: PCDH-GAMMA-B2
• Location: Chr.5:141360136-141512979 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB2	NM_018923.2			NP_061746.1
	AF152331.1			AAD43725.1

Target Gene Details

• Entrez Gene ID: 56102
• Gene Name: protocadherin gamma subfamily B, 3
• Gene Aliases: PCDH-GAMMA-B3
• Location: Chr.5:141370264-141512979 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHGB3	NM_018924.4	1	2159	NP_061747.2
	NM_032097.2	1	2159	NP_115268.2
	AF152332.1	1	2028	AAD43726.1
	AF152519.1	1	2028	AAD43779.1
	BC150172.1	1	2159

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759382	Chr.5:140777355 - 141449115 on Build GRCh38	Gain	PCDHB4 PCDHA7 PCDHB18P PCDHGB8P PCDHA2 PCDHGA3 PCDHB2 PCDHGA10 PCDHGB4 PCDHAC1 PCDHGB1 PCDHB8 PCDHB11 PCDHA1 PCDHB12 PCDHGA6 PCDHA4 PCDHA5 PCDHGA1 PCDHGB3 PCDHB5 PCDHGA5 PCDHB10 PCDHGB2 PCDHB3 PCDHB15 PCDHB1 PCDHB13 PCDHA6 PCDHA10 PCDHA9 SLC25A2 PCDHGB6 PCDHA13 PCDHB17P PCDHGA2 PCDHGA12 TAF7 PCDHGA11 PCDHB6 PCDHB7 PCDHGA8 PCDHAC2 PCDHB9 PCDHB16 PCDHB14 PCDHA3 PCDHB19P PCDHGB5 PCDHA8 PCDHA12 PCDHGA9 PCDHGA4 PCDHGB7 PCDHGA7 LOC101926905 PCDHA11
nsv599922	Chr.5:141341879 - 141416532 on Build GRCh38	Loss	PCDHGA8 PCDHGB3 PCDHGA3 PCDHGB6 PCDHGA10 PCDHGA5 PCDHGB4 PCDHGA2 PCDHGB1 PCDHGB5 PCDHGB2 PCDHGA6 PCDHGA9 PCDHGA4 PCDHGA7 PCDHGA1

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
endosome to lysosome transport
lipid tube assembly involved in organelle fusion

Function(s)

calcium ion binding