Assay Details
Target Gene Details
Entrez Gene ID: | 54910 |
Gene Name: | semaphorin 4C |
Gene Aliases: |
M-SEMA-F, SEMACL1, SEMAF, SEMAI |
Location: |
Chr.2:96859736-96870943 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEMA4C | NM_017789.4 | 10 | 1210 | NP_060259.4 |
XM_006712606.3 | 10 | 1314 | XP_006712669.2 | |
XM_011511378.2 | 10 | 1318 | XP_011509680.1 | |
XM_011511379.2 | 10 | 1315 | XP_011509681.1 | |
XM_011511380.1 | 10 | 1653 | XP_011509682.1 | |
XM_011511381.1 | 10 | 1287 | XP_011509683.1 | |
XM_011511382.2 | 10 | 1246 | XP_011509684.1 | |
XM_011511383.1 | 10 | 1258 | XP_011509685.1 | |
XM_017004393.1 | 9 | 1740 | XP_016859882.1 | |
XM_017004394.1 | 8 | 862 | XP_016859883.1 | |
AB051526.1 | 8 | 1440 | BAB21830.1 | |
AK000376.1 | 2 | 150 | BAA91124.1 | |
AY358842.1 | 10 | 1183 | AAQ89201.1 | |
BC017476.1 | 4 | 486 | AAH17476.2 | |
BC062984.1 | 2 | 182 | AAH62984.1 | |
BC109103.1 | 10 | 1139 | AAI09104.1 | |
BC109104.1 | 10 | 1136 | AAI09105.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv526313 | Chr.2:96667755 - 96994882 on Build GRCh38 | Loss | CNNM3 MIR3127 ANKRD23 FER1L5 SEMA4C FAM178B LMAN2L CNNM4 LOC101927053 ANKRD39 |
dgv607e201 | Chr.2:95855884 - 97561622 on Build GRCh38 | Deletion | CNNM3 ADRA2B ANKRD36C MIR3127 ANKRD36B SNRNP200 ITPRIPL1 STARD7 LMAN2L ANKRD36 LOC100506076 STARD7-AS1 ANKRD39 ASTL LOC105373496 ARID5A FAM178B KANSL3 CNNM4 DUSP2 FAHD2B LOC105373495 LOC100506123 CIAO1 FAHD2CP GPAT2 LOC653924 TMEM127 ANKRD23 FER1L5 SEMA4C LOC107984110 NCAPH LOC101927053 NEURL3 |
nsv1135873 | Chr.2:95981454 - 97579645 on Build GRCh38 | Deletion | CNNM3 ADRA2B ANKRD36C MIR3127 ANKRD36B SNRNP200 ITPRIPL1 STARD7 LMAN2L ANKRD36 LOC100506076 STARD7-AS1 ANKRD39 ASTL LOC105373496 ARID5A FAM178B KANSL3 CNNM4 DUSP2 FAHD2B LOC105373495 LOC100506123 CIAO1 FAHD2CP GPAT2 LOC653924 TMEM127 ANKRD23 FER1L5 SEMA4C LOC107984110 NCAPH LOC101927053 NEURL3 |
esv3425717 | Chr.2:95859900 - 97515905 on Build GRCh38 | Duplication | CNNM3 ADRA2B ANKRD36C MIR3127 ANKRD36B SNRNP200 ITPRIPL1 STARD7 LMAN2L ANKRD36 LOC100506076 STARD7-AS1 ANKRD39 ASTL LOC105373496 ARID5A FAM178B KANSL3 CNNM4 DUSP2 FAHD2B LOC105373495 LOC100506123 CIAO1 FAHD2CP GPAT2 LOC653924 TMEM127 ANKRD23 FER1L5 SEMA4C LOC107984110 NCAPH LOC101927053 NEURL3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |