Assay Details
Target Gene Details
Entrez Gene ID: | 51752 |
Gene Name: | endoplasmic reticulum aminopeptidase 1 |
Gene Aliases: |
A-LAP, ALAP, APPILS, ARTS-1, ARTS1, ERAAP, ERAAP1, PILS-AP, PILSAP |
Location: |
Chr.5:96759245-96935983 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ERAP1 | XM_011543480.2 | XP_011541782.1 | ||
XM_011543481.2 | XP_011541783.1 | |||
XM_011543484.2 | XP_011541786.1 | |||
XM_011543485.2 | XP_011541787.1 | |||
XM_011543486.2 | XP_011541788.1 | |||
XM_017009580.1 | XP_016865069.1 | |||
XM_017009581.1 | XP_016865070.1 | |||
AK094985.1 |
Target Gene Details
Entrez Gene ID: | 64167 |
Gene Name: | endoplasmic reticulum aminopeptidase 2 |
Gene Aliases: |
L-RAP, LRAP |
Location: |
Chr.5:96875940-96919703 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ERAP2 | XM_011543544.1 | 9 | 1639 | XP_011541846.1 |
AB109031.1 | 9 | 1606 | BAC78818.1 | |
AB163917.1 | 9 | 1606 | BAD90015.1 | |
AF191545.1 | 8 | 1578 | AAG28383.1 | |
AK074281.1 | 9 | 1683 | ||
AK074387.1 | 2 | 187 | ||
AK312864.1 | 9 | 1619 | ||
AY028805.1 | 8 | 1536 | AAK37776.1 | |
BC065240.1 | 8 | 1465 | AAH65240.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv598963 | Chr.5:96749072 - 97027703 on Build GRCh38 | Gain | LOC101929747 CAST ERAP2 LNPEP ERAP1 |
nsv598962 | Chr.5:96722187 - 97557460 on Build GRCh38 | Gain | LINC01340 LOC101929747 CAST ERAP2 LNPEP RIOK2 ERAP1 LIX1 |
dgv3349e59 | Chr.5:96896855 - 96896973 on Build GRCh38 | Tandem Duplication | ERAP2 ERAP1 |
nsv1021263 | Chr.5:96060753 - 97448132 on Build GRCh38 | Loss | LOC101929710 LOC101929747 CAST MIR583 PCSK1 ERAP2 LNPEP RIOK2 ERAP1 LIX1 |
nsv1028741 | Chr.5:96746697 - 97036461 on Build GRCh38 | Gain | LOC101929747 CAST ERAP2 LNPEP ERAP1 |
nsv1119530 | Chr.5:96896839 - 96896891 on Build GRCh38 | Insertion | ERAP2 ERAP1 |
More Information
Additional Information:
For this assay, SNP(s) [rs138729935] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |