Assay Details
Target Gene Details
Entrez Gene ID: | 2735 |
Gene Name: | GLI family zinc finger 1 |
Gene Aliases: |
GLI |
Location: |
Chr.12:57460135-57472268 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 9 - Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GLI1 | NM_001160045.1 | NP_001153517.1 | ||
NM_001167609.1 | NP_001161081.1 | |||
NM_005269.2 | NP_005260.1 | |||
XM_011538189.2 | XP_011536491.1 | |||
XM_011538190.1 | XP_011536492.1 | |||
AK297899.1 | ||||
BC013000.2 | AAH13000.1 | |||
GQ890670.2 | ||||
X07384.1 | CAA30297.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv428283 | Chr.12:57435950 - 57608085 on Build GRCh38 | Gain | KIF5A DDIT3 MBD6 DCTN2 ARHGAP9 INHBE MARS DTX3 PIP4K2C INHBC GLI1 MIR6758 MIR616 |
nsv559034 | Chr.12:57466149 - 57618450 on Build GRCh38 | Loss | KIF5A DDIT3 MBD6 DCTN2 ARHGAP9 MARS DTX3 LOC101927583 PIP4K2C GLI1 MIR6758 ARHGEF25 MIR616 |
nsv469411 | Chr.12:57450266 - 57527405 on Build GRCh38 | Loss | DDIT3 MBD6 ARHGAP9 INHBE MARS INHBC GLI1 MIR616 MIR6758 |
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | DDIT3 IL23A SNORD59A STAC3 LOC101927583 PIP4K2C NACA GLI1 TAC3 HSD17B6 APOF SHMT2 SPRYD4 NAB2 LRP1 LRP1-AS TIMELESS COQ10A RBMS2 NXPH4 CNPY2 ZBTB39 ANKRD52 OS9 STAT2 KIF5A MIP SLC26A10 CS R3HDM2 SNORD59B NEMP1 INHBC NABP2 SLC39A5 MYO1A ATP5B PTGES3 MIR616 SDR9C7 MBD6 DCTN2 ARHGAP9 INHBE MARS DTX3 PAN2 SNORA105C STAT6 BAZ2A B4GALNT1 MIR6758 MIR1228 ARHGEF25 HBCBP GPR182 RNF41 NDUFA4L2 PRIM1 RDH16 GLS2 |
nsv8974 | Chr.12:57458996 - 57472098 on Build GRCh38 | Gain | GLI1 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |