Assay Details
Target Gene Details
Entrez Gene ID: | 7015 |
Gene Name: | telomerase reverse transcriptase |
Gene Aliases: |
CMM9, DKCA2, DKCB4, EST2, PFBMFT1, TCS1, TP2, TRT, hEST2, hTRT |
Location: |
Chr.5:1253167-1295626 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 12 - Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TERT | NM_001193376.1 | NP_001180305.1 | ||
NM_198253.2 | NP_937983.2 | |||
XM_017009796.1 | XP_016865285.1 | |||
AB085628.1 | BAC11010.1 | |||
AB086379.1 | BAC11014.1 | |||
AB086950.1 | BAC11015.1 | |||
AF015950.1 | AAC51672.1 | |||
AF018167.1 | AAC51724.1 | |||
AX810036.1 | CAE75638.1 | |||
AX810378.1 | CAE75644.1 | |||
JF896281.1 | ||||
JF896283.1 | ||||
JF896284.1 | ||||
JF896285.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1024507 | Chr.5:1232783 - 1269250 on Build GRCh38 | Gain | TERT SLC6A18 |
esv3575810 | Chr.5:1055511 - 1282578 on Build GRCh38 | Gain | SLC6A19 CTD-3080P12.3 TERT MIR4635 SLC12A7 SLC6A18 |
nsv509044 | Chr.5:1147636 - 1265572 on Build GRCh38 | Insertion | SLC6A19 CTD-3080P12.3 TERT SLC12A7 SLC6A18 |
nsv950627 | Chr.5:1008886 - 1300685 on Build GRCh38 | Deletion | SLC6A19 CTD-3080P12.3 TERT MIR4635 NKD2 SLC12A7 SLC6A18 |
nsv596629 | Chr.5:457146 - 1468172 on Build GRCh38 | Gain | SLC6A3 ZDHHC11B SLC6A19 CTD-3080P12.3 EXOC3 TERT MIR4635 TPPP LOC101929895 LOC100506688 LOC100996325 PP7080 NKD2 CLPTM1L CEP72 LPCAT1 SLC9A3 LINC01511 MIR4456 SLC6A18 ZDHHC11 MIR4457 SLC12A7 LOC100288152 BRD9 TRIP13 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |