Assay Details
Target Gene Details
Entrez Gene ID: | 146712 |
Gene Name: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 |
Gene Aliases: |
3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1 |
Location: |
Chr.17:82942149-83051845 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 15 - Intron 16 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B3GNTL1 | NM_001009905.2 | NP_001009905.1 | ||
NM_001320742.1 | NP_001307671.1 | |||
NM_001320743.1 | NP_001307672.1 | |||
NR_135465.1 | ||||
NR_135466.1 | ||||
XM_006722272.3 | XP_006722335.1 | |||
XM_011523532.2 | XP_011521834.1 | |||
XM_011523535.1 | XP_011521837.1 | |||
XM_017024205.1 | XP_016879694.1 | |||
XM_017024206.1 | XP_016879695.1 | |||
AK054757.1 | ||||
AY304503.1 | AAQ74775.1 | |||
AY634364.1 | AAT47555.1 | |||
BC019623.1 | AAH19623.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1067553 | Chr.17:82530808 - 83091923 on Build GRCh38 | Loss | FN3K FOXK2 MIR4525 ZNF750 METRNL TBCD LOC101929552 WDR45B LOC105371944 LOC105376791 FN3KRP RAB40B B3GNTL1 |
dgv3296n100 | Chr.17:82851564 - 83091923 on Build GRCh38 | Gain | LOC105371944 METRNL B3GNTL1 TBCD |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | AATK STRA13 MIR6787 CEP131 ALYREF C17orf89 DCXR TBCD P4HB C17orf62 DUS1L LOC105376791 FN3KRP CCDC57 TMEM105 MIR6786 ARHGDIA NPB MAFG SECTM1 FOXK2 NOTUM MYADML2 RAC3 GPS1 WDR45B UTS2R SNORD134 SLC38A10 LRRC45 ASPSCR1 RFNG HEXDC NARF ANAPC11 SLC16A3 B3GNTL1 BAHCC1 LOC101929511 MRPL12 CD7 PDE6G FN3K MCRIP1 MAFG-AS1 MIR4525 PPP1R27 LINC00482 SIRT7 HGS LOC105371925 LOC101929552 LOC105371944 TSPAN10 FAAP100 AATK-AS1 GCGR MIR3186 TEX19 PCYT2 MIR4740 PYCR1 FSCN2 ZNF750 ARL16 ACTG1 LOC100130370 OGFOD3 FASN CSNK1D CCDC137 RAB40B OXLD1 LOC105376790 SLC25A10 NPLOC4 TEPSIN |
dgv3298n100 | Chr.17:82955017 - 83091923 on Build GRCh38 | Gain | METRNL B3GNTL1 |
nsv576217 | Chr.17:82937869 - 82960820 on Build GRCh38 | Loss | LOC105371944 B3GNTL1 TBCD |
nsv529032 | Chr.17:82946968 - 82963153 on Build GRCh38 | Loss | B3GNTL1 |
dgv3297n100 | Chr.17:82879855 - 83048753 on Build GRCh38 | Gain | LOC105371944 B3GNTL1 TBCD |
esv3893052 | Chr.17:82895301 - 83102003 on Build GRCh38 | Gain | LOC105371944 METRNL B3GNTL1 TBCD |
nsv1057153 | Chr.17:82876571 - 83091923 on Build GRCh38 | Loss | LOC105371944 METRNL B3GNTL1 TBCD |
nsv1063195 | Chr.17:82947423 - 82998143 on Build GRCh38 | Gain | B3GNTL1 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | STRA13 MIR6787 METRNL ALYREF DCXR TBCD P4HB C17orf62 DUS1L LOC105376791 FN3KRP CCDC57 ARHGDIA NPB MAFG SECTM1 FOXK2 NOTUM MYADML2 RAC3 GPS1 WDR45B UTS2R SNORD134 LRRC45 ASPSCR1 RFNG HEXDC NARF ANAPC11 SLC16A3 B3GNTL1 LOC101929511 CD7 FN3K MCRIP1 MAFG-AS1 MIR4525 PPP1R27 SIRT7 LOC101929552 LOC105371944 TEX19 PCYT2 PYCR1 ZNF750 OGFOD3 FASN CSNK1D RAB40B LOC105376790 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |