Assay Details
Target Gene Details
Entrez Gene ID: | 81889 |
Gene Name: | fumarylacetoacetate hydrolase domain containing 1 |
Gene Aliases: |
C16orf36, YISKL |
Location: |
Chr.16:1827224-1840207 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAHD1 | NM_001018104.2 | 3 | 1497 | NP_001018114.1 |
NM_001142398.1 | 2 | 1378 | NP_001135870.1 | |
BC063017.1 | 2 | 1382 | AAH63017.1 |
Target Gene Details
Entrez Gene ID: | 254528 |
Gene Name: | meiosis specific with OB domains |
Gene Aliases: |
C16orf73, gs129 |
Location: |
Chr.16:1833983-1872178 on Build GRCh38 |
Assay Gene Location: | Within Intron 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MEIOB | NM_001163560.2 | NP_001157032.1 | ||
NM_152764.2 | NP_689977.2 | |||
BC029829.1 | AAH29829.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv517196 | Chr.16:1729694 - 1844960 on Build GRCh38 | Gain+Loss | FAHD1 MIR3177 IGFALS MRPS34 SPSB3 MEIOB NME3 NUBP2 EME2 MAPK8IP3 HAGH |
nsv833119 | Chr.16:1834308 - 1911484 on Build GRCh38 | Loss | FAHD1 HS3ST6 MEIOB LINC00254 |
nsv571175 | Chr.16:1806439 - 1875278 on Build GRCh38 | Loss | FAHD1 MEIOB HAGH |
nsv1040440 | Chr.16:1811739 - 1866102 on Build GRCh38 | Gain | FAHD1 MEIOB HAGH |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | METRN SNORD60 FLJ42627 RAB40C LOC105371049 WDR24 MIR662 ABCA17P ARHGDIG UBE2I WFIKKN1 HAGH DDX11L10 LOC105371047 KCTD5 LOC106660606 LOC107987233 METTL26 CEMP1 SLC9A3R2 NPRL3 ECI1 MIR3180-5 TMEM8A TPSD1 SSTR5 CCNF HAGHL MRPS34 TBC1D24 HBQ1 MIR5587 CACNA1H SSTR5-AS1 ERVK13-1 BRICD5 ATP6V0C RNF151 LINC00235 C16orf91 CRAMP1 HBA2 PRSS27 PRSS29P FAM173A RHOT2 LINC00254 MIR3177 E4F1 NDUFB10 MIR6767 LOC100287175 C16orf59 PTX4 TPSG1 MIR3176 WASIR2 EME2 POLR3K MIR4516 MIR1225 SYNGR3 LOC652276 ABCA3 LOC100134368 SOX8 SNRNP25 GFER NME4 LOC105371046 LOC729652 NPW PKD1 LOC105371045 MIR3178 WDR90 MIR6859-4 TPSB2 RPL3L PGP MIR3677 LOC107984876 ZNF598 DECR2 SNORA10 NTN3 PRR35 LOC105371038 SNHG19 NME3 NARFL LMF1-AS1 MCRIP2 SNHG9 MAPK8IP3 BAIAP3 AMDHD2 RNPS1 TBL3 CASKIN1 NTHL1 SNORA78 TSR3 DNASE1L2 MIR940 PDPK1 RAB11FIP3 PIGQ FAM234A MIR4717 MLST8 TPSAB1 FBXL16 GNPTG TELO2 MIR6511B1 UNKL NUBP2 SNORA64 HBZ FAHD1 LMF1 LUC7L IGFALS TRAF7 JMJD8 HBA1 HN1L TSC2 LOC105371184 MSRB1 RPL23AP5 LOC101929280 MEIOB RHBDL1 NOXO1 PDIA2 MPG HBM PRR25 TMEM204 HS3ST6 MSLN SPSB3 MIR6768 RGS11 CAPN15 GNG13 CLCN7 NHLRC4 MRPL28 C1QTNF8 CCDC154 RHBDF1 CHTF18 RAB26 RPS2 RPUSD1 IFT140 AXIN1 CCDC78 STUB1 |
nsv1051692 | Chr.16:1505070 - 1866102 on Build GRCh38 | Loss | MIR3177 MRPS34 LOC105371046 MEIOB NME3 TELO2 NUBP2 EME2 MAPK8IP3 HAGH TMEM204 FAHD1 LOC105371047 IGFALS CRAMP1 SPSB3 IFT140 HN1L |
nsv1042986 | Chr.16:1784723 - 1866102 on Build GRCh38 | Loss | FAHD1 IGFALS MEIOB NUBP2 HAGH |
nsv457337 | Chr.16:1813519 - 1855005 on Build GRCh38 | Loss | FAHD1 MEIOB HAGH |
nsv571177 | Chr.16:1817039 - 1897015 on Build GRCh38 | Gain | FAHD1 MEIOB HAGH LINC00254 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |