Assay Details
Target Gene Details
Entrez Gene ID: | 10732 |
Gene Name: | transcription factor like 5 |
Gene Aliases: |
CHA, E2BP-1, Figlb, bHLHe82 |
Location: |
Chr.20:62841014-62861763 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCFL5 | NM_006602.3 | 6 | 2071 | NP_006593.2 |
XM_005260185.3 | 6 | 1975 | XP_005260242.1 | |
AB012124.1 | 6 | 1932 | BAA36557.1 | |
AF070992.1 | 6 | 1909 | AAD53986.1 | |
CA419503.1 | 1 | 505 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834027 | Chr.20:62707655 - 62874914 on Build GRCh38 | Loss | LOC107985428 OGFR LOC107987285 MRGBP LINC00659 OGFR-AS1 NTSR1 DPH3P1 TCFL5 COL9A3 |
nsv828794 | Chr.20:62832958 - 62880035 on Build GRCh38 | Loss | DIDO1 DPH3P1 TCFL5 COL9A3 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | LINC01056 BIRC7 YTHDF1 LOC102723788 EEF1A2 GID8 CHRNA4 BHLHE23 PTK6 TCFL5 LINC00029 FNDC11 LOC100130152 GMEB2 LOC63930 MIR3196 DPH3P1 ARFGAP1 LOC107985428 PPDPF OGFR MRGBP NKAIN4 SRMS HAR1A KCNQ2 FLJ16779 HELZ2 DIDO1 MIR124-3 LOC107985425 MIR4326 COL20A1 LINC00659 HAR1B OGFR-AS1 LOC100130587 SLC17A9 COL9A3 |
nsv428380 | Chr.20:62632018 - 62935383 on Build GRCh38 | Loss | LOC107985428 OGFR MRGBP NTSR1 TCFL5 SLCO4A1-AS1 DIDO1 LOC107987285 LINC00659 OGFR-AS1 DPH3P1 SLCO4A1 COL9A3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |