Assay Details
Target Gene Details
Entrez Gene ID: | 57491 |
Gene Name: | aryl-hydrocarbon receptor repressor |
Gene Aliases: |
AHH, AHHR, bHLHe77 |
Location: |
Chr.5:304176-438291 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AHRR | NM_001242412.1 | NP_001229341.1 | ||
NM_020731.4 | NP_065782.2 | |||
AB033060.1 | ||||
BC151852.1 | ||||
BC152406.1 | ||||
EU293605.1 |
Target Gene Details
Entrez Gene ID: | 10016 |
Gene Name: | programmed cell death 6 |
Gene Aliases: |
ALG-2, ALG2, PEF1B |
Location: |
Chr.5:271621-314974 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PDCD6 | NM_001267556.1 | NP_001254485.1 | ||
NM_001267557.1 | NP_001254486.1 | |||
NM_001267558.1 | NP_001254487.1 | |||
NM_001267559.1 | NP_001254488.1 | |||
NM_013232.3 | NP_037364.1 | |||
AF035606.1 | AAC27697.1 | |||
AK001917.1 | ||||
AK124302.1 | ||||
AK223366.1 | BAD97086.1 | |||
BC012384.1 | AAH12384.1 | |||
BC110291.1 | AAI10292.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759315 | Chr.5:17263 - 595840 on Build GRCh38 | Loss | EXOC3-AS1 PDCD6 LOC100288152 MIR4456 SDHA SLC9A3 AHRR PP7080 CCDC127 LRRC14B EXOC3 HRAT5 PLEKHG4B |
esv3894107 | Chr.5:81322 - 801057 on Build GRCh38 | Gain | EXOC3-AS1 PDCD6 LOC100996325 LOC100288152 MIR4456 ZDHHC11B SDHA LOC101929895 SLC9A3 CEP72 AHRR PP7080 ZDHHC11 CCDC127 LRRC14B EXOC3 HRAT5 PLEKHG4B TPPP |
nsv428458 | Chr.5:93781 - 338972 on Build GRCh38 | Loss | PDCD6 AHRR CCDC127 LRRC14B SDHA HRAT5 PLEKHG4B |
esv2752083 | Chr.5:28951 - 346521 on Build GRCh38 | Gain | PDCD6 AHRR CCDC127 LRRC14B SDHA HRAT5 PLEKHG4B |
nsv1148167 | Chr.5:313785 - 314970 on Build GRCh38 | Deletion | PDCD6 AHRR |
nsv1030767 | Chr.5:154674 - 457840 on Build GRCh38 | Gain | EXOC3-AS1 PDCD6 AHRR CCDC127 LRRC14B EXOC3 SDHA HRAT5 PLEKHG4B |
nsv461887 | Chr.5:299506 - 438449 on Build GRCh38 | Gain | PDCD6 AHRR |
nsv509041 | Chr.5:314395 - 438288 on Build GRCh38 | Insertion | PDCD6 AHRR |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |