Assay Details
Target Gene Details
Entrez Gene ID: | 9510 |
Gene Name: | ADAM metallopeptidase with thrombospondin type 1 motif 1 |
Gene Aliases: |
C3-C5, METH1 |
Location: |
Chr.21:26836287-26845409 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ADAMTS1 | NM_006988.4 | 3 | 1600 | NP_008919.3 |
AB037767.1 | 3 | 1260 | ||
AF060152.1 | 3 | 1331 | AAD48080.1 | |
AF170084.1 | 3 | 1387 | AAF15317.1 | |
AF207664.1 | 3 | 1587 | AAF23772.1 | |
AK129873.1 | BAC85245.1 | |||
AK314475.1 | 3 | 1600 | ||
BC036515.2 | 3 | 1600 | AAH36515.1 | |
BX647388.1 | 3 | 1599 | CAI46043.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv470897 | Chr.21:26823726 - 26843747 on Build GRCh38 | Loss | ADAMTS1 |
nsv834068 | Chr.21:26807351 - 26988489 on Build GRCh38 | Loss | MIR4759 ADAMTS1 ADAMTS5 LOC107987291 |
nsv1066573 | Chr.21:26724037 - 27002035 on Build GRCh38 | Gain | MIR4759 ADAMTS1 ADAMTS5 LOC107987291 |
nsv3482 | Chr.21:26818978 - 26849656 on Build GRCh38 | Deletion | ADAMTS1 |
More Information
Additional Information:
For this assay, SNP(s) [rs77718820] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |