Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | 2 | 203 | NP_001192183.1 |
NM_001205255.1 | 1 | 65 | NP_001192184.1 | |
NM_002538.3 | 2 | 433 | NP_002529.1 | |
XM_017008913.1 | 2 | 203 | XP_016864402.1 | |
XM_017008914.1 | 2 | 178 | XP_016864403.1 | |
AB451306.1 | ||||
AB451437.1 | ||||
AK290697.1 | 2 | 165 | ||
AK313501.1 | 2 | 176 | ||
BC029886.1 | 2 | 175 | AAH29886.1 | |
DB226845.1 | 2 | 203 | ||
FJ786083.1 | 1 | 41 | ||
FJ786084.1 | 1 | 41 | ||
GQ225096.1 | 1 | 41 | ||
GQ225097.1 | 1 | 41 | ||
GQ225098.1 | 1 | 41 | ||
GQ402517.1 | 1 | 41 | ||
U49184.1 | 2 | 164 | AAC50451.1 | |
U53823.1 | 2 | 434 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | GTF2H2C LOC101928924 LOC728488 OCLN GUSBP3 |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | LOC107986354 LOC728526 SMN1 LOC653080 TAF9 CDK7 CCDC125 MARVELD2 NAIP LOC101928924 OCLN GTF2H2B GUSBP3 LOC101929599 LOC441081 GTF2H2 GTF2H2C LOC728488 SERF1A SMN2 SMA5 RAD17 SERF1B LOC107986351 LOC647859 AK6 SMA4 |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | GTF2H2C LOC101928924 OCLN |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | PMCHL2 LOC107986354 LOC728526 SMN1 LOC102724392 LOC653080 TAF9 MARVELD2 NAIP LOC101928924 OCLN GTF2H2B BDP1 GUSBP3 LOC101929599 LOC107986352 LOC441081 GTF2H2 GTF2H2C LOC728488 SERF1A SMN2 LOC107986353 SMA5 RAD17 SERF1B LOC107986351 LOC647859 AK6 GUSBP9 SMA4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |