Assay Details
Target Gene Details
Entrez Gene ID: | 152330 |
Gene Name: | contactin 4 |
Gene Aliases: |
AXCAM, BIG-2 |
Location: |
Chr.3:2098771-3059080 on Build GRCh38 |
Assay Gene Location: | Within Exon 28 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNTN4 | NM_001206955.1 | 19 | 2695 | NP_001193884.1 |
NM_001206956.1 | 11 | 1414 | NP_001193885.1 | |
NM_175607.2 | 20 | 2650 | NP_783200.1 | |
NM_175613.2 | 11 | 1417 | NP_783302.1 | |
XM_006713004.3 | 19 | 2660 | XP_006713067.1 | |
XM_011533425.2 | 19 | 2663 | XP_011531727.1 | |
XM_011533426.2 | 20 | 2882 | XP_011531728.1 | |
XM_011533427.2 | 20 | 2863 | XP_011531729.1 | |
XM_011533428.2 | 18 | 2852 | XP_011531730.1 | |
XM_011533429.2 | 18 | 2787 | XP_011531731.1 | |
XM_011533430.2 | 18 | 2748 | XP_011531732.1 | |
XM_011533431.2 | 17 | 5497 | XP_011531733.1 | |
XM_017005782.1 | 20 | 2605 | XP_016861271.1 | |
XM_017005783.1 | 21 | 3479 | XP_016861272.1 | |
XM_017005784.1 | 19 | 2940 | XP_016861273.1 | |
XM_017005785.1 | 20 | 2587 | XP_016861274.1 | |
XM_017005786.1 | 18 | 2849 | XP_016861275.1 | |
XM_017005787.1 | 18 | 2745 | XP_016861276.1 | |
AF464063.1 | 1 | 561 | AAN86141.1 | |
AF549455.1 | 17 | 2693 | AAP05786.1 | |
AK057278.1 | 11 | 1395 | ||
AK097633.1 | 14 | 1941 | ||
AK125460.1 | 19 | 2838 | ||
AK314396.1 | 11 | 1395 | ||
AY090737.1 | 19 | 2532 | AAM00025.1 | |
BC026119.1 | 11 | 1397 | AAH26119.1 |
Target Gene Details
Entrez Gene ID: | 100873975 |
Gene Name: | CNTN4 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.3:3039661-3061145 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNTN4-AS1 | NR_046554.1 | 4 | 489 | |
BM920658.1 | 4 | 489 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv589371 | Chr.3:2170634 - 3594980 on Build GRCh38 | Loss |
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esv2751994 | Chr.3:2200757 - 3178886 on Build GRCh38 | Gain |
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esv2422274 | Chr.3:2100396 - 3314907 on Build GRCh38 | Duplication |
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nsv1011872 | Chr.3:2782874 - 3057776 on Build GRCh38 | Gain |
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nsv521796 | Chr.3:3038825 - 3151219 on Build GRCh38 | Loss |
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dgv4636n100 | Chr.3:2825734 - 3271845 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
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Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)