Assay Details
Target Gene Details
Entrez Gene ID: | 57333 |
Gene Name: | reticulocalbin 3 |
Gene Aliases: |
RLP49 |
Location: |
Chr.19:49527579-49543638 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RCN3 | NM_020650.2 | 7 | 1358 | NP_065701.2 |
XM_005259089.3 | 8 | 1453 | XP_005259146.1 | |
XM_011527143.1 | 8 | 1547 | XP_011525445.1 | |
XM_017027023.1 | 7 | 1632 | XP_016882512.1 | |
AF183423.1 | 6 | 943 | AAG09692.1 | |
AY195859.1 | 7 | 1358 | AAO43054.1 | |
AY358423.1 | 7 | 945 | AAQ88789.1 | |
BC013436.1 | 7 | 941 | AAH13436.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | CGB5 MIR5088 SNAR-C4 SPHK2 PLA2G4C MIR4324 DHDH SNAR-C2 SNORD33 FLJ26850 RPL18 SNAR-C3 IZUMO1 CABP5 SNAR-A10 CGB3 ATF5 ALDH16A1 RASIP1 CA11 KDELR1 LOC101928295 SNRNP70 CCDC114 MIR4751 MED25 MIR4750 TSKS SNORD35B SNAR-A14 GRWD1 SULT2B1 MIR4749 CYTH2 LOC101059948 PRRG2 LOC105447645 PIH1D1 PNKP FLT3LG CGB1 IL4I1 SNAR-G1 SPACA4 DBP SLC17A7 CD37 ZNF114 TULP2 PPFIA3 SNORD32A DKKL1 PPP1R15A FUT2 SNAR-A12 SNAR-A6 FAM83E AP2A1 RPL13A SNAR-G2 BAX LIN7B MIR6800 SIGLEC11 FUZ SNAR-A8 SLC6A16 PLA2G4C-AS1 SCAF1 SYNGR4 NUCB1-AS1 SNAR-A9 VRK3 KCNA7 HRC SNAR-A3 BSPH1 MIR150 FTL RCN3 HSD17B14 NUCB1 FGF21 SNAR-B1 CCDC155 SNAR-A2 PLEKHA4 TMEM143 MIR6799 CPT1C C19orf68 SNAR-A11 LIG1 RUVBL2 RRAS LMTK3 RPS11 TEAD2 PRMT1 TRPM4 PTH2 BCAT2 SEC1P KCNJ14 LHB SNAR-A5 AKT1S1 SNORD34 ZNF473 FCGRT CGB2 SNAR-A13 MIR6798 IRF3 BCL2L12 NUP62 SNAR-D LOC100287477 NTF4 SNAR-A7 C19orf73 EMP3 LOC105372430 NOSIP CARD8 MAMSTR SNAR-C1 SNAR-A1 CGB8 SNAR-B2 SNAR-C5 GRIN2D SNAR-A4 ELSPBP1 SNORD35A SIGLEC16 CARD8-AS1 NTN5 TBC1D17 PTOV1 GFY PTOV1-AS2 CGB7 PRR12 PTOV1-AS1 FUT1 GYS1 ADM5 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | SNORD33 SNORD35B SNORD35A SNORD32A NOSIP SNORD34 FCGRT PRRG2 RPL13A PRR12 MIR150 FLT3LG RCN3 RPS11 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD33 SNORD35B SNORD35A SNORD32A NOSIP SNORD34 FCGRT PIH1D1 RPL13A MIR150 FLT3LG RCN3 RPS11 ALDH16A1 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | MIR5088 SNORD33 SNORD32A NOSIP MIR6799 CPT1C AP2A1 RPL13A RRAS RPS11 MIR6800 FUZ PRMT1 MED25 TSKS SCAF1 SNORD35B SNORD35A SNORD34 FCGRT PRRG2 IRF3 BCL2L12 PRR12 MIR150 PTOV1-AS1 RCN3 ADM5 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |