Assay Details
Target Gene Details
Entrez Gene ID: | 200150 |
Gene Name: | phospholipase D family member 5 |
Gene Aliases: |
PLDC |
Location: |
Chr.1:242085051-242530546 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLD5 | NM_001195811.1 | 10 | 2378 | NP_001182740.1 |
NM_001195812.1 | 9 | 2216 | NP_001182741.1 | |
NM_001320272.1 | 11 | 2672 | NP_001307201.1 | |
NM_152666.2 | 11 | 2665 | NP_689879.2 | |
XM_006711752.2 | 10 | 2832 | XP_006711815.1 | |
XM_011544115.2 | 12 | 2740 | XP_011542417.1 | |
XM_011544116.2 | 12 | 2568 | XP_011542418.1 | |
XM_011544119.2 | 7 | 2739 | XP_011542421.2 | |
XM_011544120.2 | 10 | 2384 | XP_011542422.1 | |
XM_011544121.2 | 7 | 1873 | XP_011542423.1 | |
XM_011544122.2 | 7 | 3334 | XP_011542424.1 | |
XM_017000567.1 | 10 | 2845 | XP_016856056.1 | |
XM_017000568.1 | 10 | 2366 | XP_016856057.1 | |
XM_017000569.1 | 10 | 4345 | XP_016856058.1 | |
XM_017000570.1 | 8 | 3085 | XP_016856059.1 | |
AK091691.1 | 9 | 2190 | BAC03722.1 | |
AK098092.1 | 11 | 2672 | BAC05230.1 | |
AL133851.1 | 1 | 255 | ||
AY461578.1 | 10 | 2378 | ||
BU581400.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv549462 | Chr.1:242037945 - 242392647 on Build GRCh38 | Gain |
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dgv16e55 | Chr.1:241861796 - 242169657 on Build GRCh38 | Gain |
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nsv528016 | Chr.1:242060097 - 242288048 on Build GRCh38 | Gain |
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nsv1002309 | Chr.1:241878940 - 242132333 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs74153320] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)