Assay Details
Target Gene Details
Entrez Gene ID: | 84867 |
Gene Name: | protein tyrosine phosphatase, non-receptor type 5 |
Gene Aliases: |
PTPSTEP, STEP, STEP61 |
Location: |
Chr.11:18727928-18792721 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 13 - Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PTPN5 | NM_001039970.1 | NP_001035059.1 | ||
NM_001278236.1 | NP_001265165.1 | |||
NM_001278238.1 | NP_001265167.1 | |||
NM_001278239.1 | NP_001265168.1 | |||
NM_006906.1 | NP_008837.1 | |||
NM_032781.3 | NP_116170.3 | |||
XM_011520411.2 | XP_011518713.1 | |||
XM_017018434.1 | XP_016873923.1 | |||
XM_017018435.1 | XP_016873924.1 | |||
XM_017018436.1 | XP_016873925.1 | |||
XM_017018437.1 | XP_016873926.1 | |||
XM_017018438.1 | XP_016873927.1 | |||
XM_017018439.1 | XP_016873928.1 | |||
XM_017018440.1 | XP_016873929.1 | |||
AK055450.1 | 1 | 932 | ||
AK090923.1 | BAC03548.1 | |||
AK127312.1 | ||||
AK294374.1 | ||||
AK294673.1 | ||||
AK295604.1 | ||||
AK316270.1 | ||||
AL832541.1 | CAD38632.2 | |||
BC039897.1 | AAH39897.1 | |||
BC046435.1 | AAH46435.1 | |||
BC064807.1 | AAH64807.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1047371 | Chr.11:18709926 - 18741490 on Build GRCh38 | Gain | IGSF22 PTPN5 |
nsv553633 | Chr.11:18290154 - 19036904 on Build GRCh38 | Gain | MIR3159 LDHC HPS5 SPTY2D1-AS1 UEVLD PTPN5 TSG101 SPTY2D1 GTF2H1 TMEM86A MRGPRX1 IGSF22 LDHAL6A LDHA |
nsv525192 | Chr.11:18701244 - 18771813 on Build GRCh38 | Loss | TMEM86A IGSF22 PTPN5 |
nsv525452 | Chr.11:18714400 - 18780956 on Build GRCh38 | Gain | IGSF22 PTPN5 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |